Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0234 ATGCCTCCTCGCCGCCGTGCCGGAAAGCAACCTCAAACTCCCCCTCCTCAACCGTCTCCGTCTCCGGCGCCATCCCAATCTTCTCGGAGTCCAGATGTTTCCGGAGGCCCGCCACAACGACCCGTCGCTCCGGCCACTGCGCCGGTTGCTCCGACCGATGAACTGCGTCAGCTCACTTTGCAGCCTCCGGCGCCGTCGTCGTCTAAGGCCCTTAGATTTGCTGATCGACCAGATTTTGGTAGAATGGGGAAAAGAATTCAAGTCCGTGCGAATCATTTCCTTGTGAATGTTGCTGATATAGATCTTCACCACTACGATGTATCCATATCCCCTGAAATTACTTCCAAAAAGATCAATAGAGATGTGATGAATCAGTTAGTCCAGTTGTACCGAAAGTCACACATGGACAAGCGAATACCAGCTTATGATGGTCGCAAGAGTCTTTTCACAGCTGGCCCTCTGCCTTTCTTGTCAAAGGAATTTGTCGTCAAGTTGGTAGATAGCGATAAACCTGGCAGTTCTTCTGGATCAAAGAGCAACAAACGGGAGCGCGAGTTCAAGGTCACCATTCGTTATGCTTCCAAGCCTGATCTCCATCATCTGCAGCAGTTTCTAAGAAGTCTACAGCTGGATAATCCCCAAGAAACAATTCAAGCCTTCGACGTTGTCCTGAGGGCATTACCATCTGAAAAGTATACTGTTGTTGGGAGATCATTTTTCTCACCAAATTTGGGTCAAACTGGCGAGCTTGGTGATGGATTAGAATATTGGAGAGGATATTATCAAAGCCTTCGCCCGACTCAGATGGGACTTTCTCTTAATATTGATGTATCAGCAAGGGCATTTTATGAAAACATTTTTGTGACCGACTTTATTGCAAAGCACTATAATTTTAATTTTTCGAGGCCTCTGTCTGATCAGGATAGAATTAAGGTTAAGAAAACTCTGAGGGGAGTAAAGGTAGAATTCACTAACGGTCAGATTACTAGAAGTTACAAAATTACTGGAGTCTCCAAGGAACCACTCAGTGAGTTGAGGTTTACTCTCGATGACAAGAGAACAAAGACAACTGTTGTTAGATATTTTCATGAGAAATACAATGTTGAGCTGAAGTATTTGTCGCTTCCTGCCCTGCAAGCCGGGAGTGATACAAAGCCTATTTATTTGCCTATGGAGCTTTGCAAGATAGCTGCTGGACAAAGGTACTCAAAGAAACTGAATGAGAGGCAAGTAACTGCTCTTTTGAGAGCAACATGTCAACGACCTTGTGACAGGGAGAGGGACATCAGAGGGATTTCCAGACGCAACAATTTCAACAGAGATGAGCTTGTGCGAGAATTTGGAATTACAGTGAGTGAAGAACTAGCTTTGTGTGAAGCACGTGTTTTGCCTCCTCCAAGGCTTAAATACCATGAAAGTGGGAAGGAACCAATTGTTGAACCCTCAAGGGGTCAGTGGAATATGATAAACAAGAAAATGTTTAATGGTGGAATTGTGCAATATTGGACTTGCCTAAACTTTTCTACACGGGTGAGCAGAGATTTGCCATTTCAATTCTGTAATGAGTTGTCAAGCATGTGCACCAGTAAGGGGATGGTTTTCAATAGAAACCCTTTACTTCCTATAAAGTCAGCTCATCCTAGTCAAATAGAGGGAGTTCTAAGAGAAGTTTACCAGAAGTCTGGTGGGAAACTTCAGCTGTTGATTATAATCTTGCCTGACTATAAAGGTTCTTATGCGAAGATTAAACGCATTTGTGAAACAGAATTGGGAATAGTGTCTCAATGCTCTCAGCCCAAGGAAGCTTCAAAGCTACAGAAGCAATATCTGGAAAATCTGGCCCTCAAGATCAATGTTAAGGTTGGGGGCCGCAATACAGTCTTGATGGATGCAATTCAAAGGAGAATTCCTCATGTGTCTGATTGCCCTACTATAATATTTGGGGCAGATGTAACACATCCTCAGCCTGGAGAGGACTCGGGCCCTTCTATAGCAGCTGTAGTTGCATCCATGGATTGGCCAGAGGTCAGCAAGTATCGTGGAATTGTATCTGCCCAGGCGCATCGAGAAGAAATTATTTTAGATCTGTATAAAACTTCTCATGATCCTGACAAGGGAGTTGTACAAGGTGGAATGATAAGAGAGCTGCTTATGGCATTCTATAAATCAACCAAATTTAAGCCAAGCAGGATTATTTTCTACAGAGATGGAGTCAGTGAAGGTCAATTTAGTCAGGTTTTACTCCATGAGATGGAAGCTATAAGAAAGGCATGTGCCTCATTACAAGAAGGATATCTCCCAAAAGTAACCTTCTTGGTTGTACAGAAAAGACACCACACTCGTTTCTTTCCTGTTGATCATAACAGTCGAGATCAAACTGATAGGAGCGGAAATATTTTGCCAGGCACTGTTGTTGACACTCGTATCTGTCACCCCAGAGAATTTGATTTTTACCTCAATAGTCATGCCGGCATTAAGGGAACTAGCCGACCTACACACTATCATGTTCTATTTGATGAAAACAATTTTAAGGCTGATGAGTTGCAGACTCTAACAAATAACCTGTGTTACACGTATGCAAGGTGCACTAAATCAGTTTCAATAGTTCCTCCAGCATATTATGCTCATTTGGCTGCTTTCCGTGCTCGTTACTACATTGAAAGCGAAACGTCGGAGGTGGATTCTGGAAGCGGAAGTAGGAGCACTAATGTAGCGGTAACTCTTCCGGCAATCAAGGACAATGTCAAAGATGTTATGTTTTACTGCTAA 2769 0.4345 MPPRRRAGKQPQTPPPQPSPSPAPSQSSRSPDVSGGPPQRPVAPATAPVAPTDELRQLTLQPPAPSSSKALRFADRPDFGRMGKRIQVRANHFLVNVADIDLHHYDVSISPEITSKKINRDVMNQLVQLYRKSHMDKRIPAYDGRKSLFTAGPLPFLSKEFVVKLVDSDKPGSSSGSKSNKREREFKVTIRYASKPDLHHLQQFLRSLQLDNPQETIQAFDVVLRALPSEKYTVVGRSFFSPNLGQTGELGDGLEYWRGYYQSLRPTQMGLSLNIDVSARAFYENIFVTDFIAKHYNFNFSRPLSDQDRIKVKKTLRGVKVEFTNGQITRSYKITGVSKEPLSELRFTLDDKRTKTTVVRYFHEKYNVELKYLSLPALQAGSDTKPIYLPMELCKIAAGQRYSKKLNERQVTALLRATCQRPCDRERDIRGISRRNNFNRDELVREFGITVSEELALCEARVLPPPRLKYHESGKEPIVEPSRGQWNMINKKMFNGGIVQYWTCLNFSTRVSRDLPFQFCNELSSMCTSKGMVFNRNPLLPIKSAHPSQIEGVLREVYQKSGGKLQLLIIILPDYKGSYAKIKRICETELGIVSQCSQPKEASKLQKQYLENLALKINVKVGGRNTVLMDAIQRRIPHVSDCPTIIFGADVTHPQPGEDSGPSIAAVVASMDWPEVSKYRGIVSAQAHREEIILDLYKTSHDPDKGVVQGGMIRELLMAFYKSTKFKPSRIIFYRDGVSEGQFSQVLLHEMEAIRKACASLQEGYLPKVTFLVVQKRHHTRFFPVDHNSRDQTDRSGNILPGTVVDTRICHPREFDFYLNSHAGIKGTSRPTHYHVLFDENNFKADELQTLTNNLCYTYARCTKSVSIVPPAYYAHLAAFRARYYIESETSEVDSGSGSRSTNVAVTLPAIKDNVKDVMFYC 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0234 922 Gene3D - 636 922 IPR036397 GO:0003676
Mibi01g0234 922 CDD PAZ_argonaute_like 288 397 - -
Mibi01g0234 922 SMART Piwi_a_2 567 887 IPR003165 GO:0003676
Mibi01g0234 922 FunFam protein argonaute 10-like 635 922 - -
Mibi01g0234 922 Gene3D paz domain 280 402 - -
Mibi01g0234 922 SMART PAZ_2_a_3 286 418 IPR003100 GO:0005515
Mibi01g0234 922 CDD Piwi_ago-like 444 886 IPR045246 -
Mibi01g0234 922 ProSiteProfiles PAZ domain profile. 286 398 IPR003100 GO:0005515
Mibi01g0234 922 ProSiteProfiles Piwi domain profile. 567 887 IPR003165 GO:0003676
Mibi01g0234 922 MobiDBLite consensus disorder prediction 1 25 - -
Mibi01g0234 922 Pfam Piwi domain 568 886 IPR003165 GO:0003676
Mibi01g0234 922 Pfam Mid domain of argonaute 481 559 IPR032473 -
Mibi01g0234 922 Gene3D - 462 629 - -
Mibi01g0234 922 MobiDBLite consensus disorder prediction 1 51 - -
Mibi01g0234 922 Pfam PAZ domain 309 414 IPR003100 GO:0005515
Mibi01g0234 922 FunFam Argonaute 10 462 629 - -
Mibi01g0234 922 SMART DUF1785_2 233 285 IPR014811 -
Mibi01g0234 922 Pfam N-terminal domain of argonaute 84 224 IPR032474 -
Mibi01g0234 922 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 63 888 - -
Mibi01g0234 922 SUPERFAMILY Ribonuclease H-like 556 887 IPR012337 -
Mibi01g0234 922 Pfam Argonaute linker 1 domain 235 284 IPR014811 -
Mibi01g0234 922 SUPERFAMILY PAZ domain 86 439 IPR036085 GO:0005515
Mibi01g0234 922 Pfam Argonaute linker 2 domain 424 470 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0234 Mibi-ChrMibi01 2260329 2266087 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0234 33 922 Eukaryotic Initiation Factors Gene Family AT1G48410 59.698 0.0 1108