Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0222 ATGGCTATTGCTGGACTACATAATCTGTCTGTGCTTGACTCTTCTTTTCTTAGGGATTCCCATTCTCAATCGCCTAGGAGGCGAGGAGATGGAGGTAGTGGAAGCACCCGATCTTCTTCAATCTTGCAAATGTGGCGAGAGATTGACGATGAGCATGTGGTGGGCCAAGTCCAAGGAAGACCGGGTGATGGATTACTTCAGCAAAGGAGTGATGAGTTCATCACTGATCTCTCACAGGCAAGTATGCCAAGTAGTCATGAGACAGGAGCGAGGCATGCTGTTGAAGATTCAATTTTGGGTGAGAATGATTGTGAAACATGGTCACAGTCACATAGTCAGCATGAATCTCCTGATGAGCAGGAGGAATTAAACAATTCTGGTTGTGATAATTCTTCTGATCTTGGAGAAGTTGAAAGGGAAAGGGTGAGGCAAATTTTCAGGGAATGGATGAAAAGTGGTGCTGGGGATCGAGCCACAAACATTCCCCAATGTAATAGCAGTTCAAGATCAGAATGGCTTGGTGAAACTGAGCAGGAGAGGGTGAGGATCATCAGGGAGTGGGTACAACTGAGTAGCCAGCAGAGAGTTATTGCTTCTGGGGACAGCAGGGAAGAACAATCAGCTGAAGTTGGCACTCAAATAGATCGAGTTCGTGATGGGTTTGCTGTTAATCAGAATGAGGGTCAAACAGAGCATATGCGAAGGGGTATTCGTAAATTATGTGGCAGACAGGTTCTGCTTGATATGCTTAAGAAGGCTGAGAGGGAAAGACAAAGAGAAGTTCAGGAATTATTGGACCATAGAGCTGTATCTCATTTCCCCCATCGCAACCGCATTCAGGCATTGCTCAGGGGTAGGTTCTTGAGAAATGACAGATCAGTTGATGCTAACCGGTCCACTTCTATAGCTGAAAGTGAATTAGGCTTACTGAGGCAAAAGCAGACTGTATCAGGTCTAAGGGAAGGAATTTTCTCTGGGAAGGACTATTCTGGTGGCAGTCAAGTAACTTCCACTCCATCGGATACCTCATCTATCAGTGGCATTGATAATAATTCAAATGAACAAACTGACTCCAGCAGTTTACATTCGGTCTTAATTGTACATTTTGAACAGTCTGAACCTACTGTTGGAGATAGTGATGGAGTTGGTATCTCAGATGGTCAGAATTTTACACATGAACCCAGTACAGTAAATTTGGATTGTCAAGACTCTTCTGCTCATACCGAAGGAAGTTCGTCACAGCTTTTGGAAAATGAGTCAAGGGATTGCCAATCATCATCCGGTGTTGAGATGGAAAGAGGAGGTGATAGCGGGCTATATGTTGTTGGGATAACAGTTGAAGATACCACTGATAGACTTGTGCATCAAAATTGTCAGATTGAAGTTGCAGAGCATGGCAATATGCAGGGATCTAGTGAGGTATATCCTGAAGAATTGGAGTTAGGTGCTTTAAGCAATTATGATAATGCTCCATCGACTCATAATGATGTTATGGAAGCCGCTATGTTAGATAATGAAAATAGGTATGTATCTACTGCTTCAGAAGAACAGCAGCAGGAAGAACTTTCTGAAAATGAAGGAAGTGATGGGAACCTGAGGAGTGGCACAGAGGAAAGTCTGGATGATAATCATCCCCATGGTACAGCCAATGAGTGGCCTCAAGACATTTTGAGCAATGAAGATGGGGAAAACTCTCCCCTACCGGAAGCCCAAGAAATGTGGCAAGAAGATGGTGGCTTTCAGGAGGCTGTGGAAAATTGGTTGGGTGGACCCTCTGATCATGAAGTTGCTCCGGTTGGTAGAATTCATGGCTTTTACTTTCCAGATGATGACAATGTGAACAGCGTTGAACTCAGGGAACTACTAAATAGGAGAAGTGTTTCTAACCTGCTCCGCAGCAGTTTCCGCGAAAGTCTTGACCAGTTGATACAATCATATGTTGAAAGGCAAGGTCATGCTAATGCTGAGTGGGAGCTGCAAGAAACAAGCCCTTCTTCTGCCTCAGTTGAACGGGACTTGGAGCAGCCACGTAGGGATCAGATTGTTGATCAGGAGGATACTATTAACAGTCCACTTGATCAACCCTCATCACCAACACCTCCTCAACCTCTCTGGGAAAGACAATCACGTCATGACAATTGGTCACGAGTTGACATGAATAATCAGCGTCTAGGGCTTAGGCATTCATTTTCTTTGGAGTGGGAGATTATCAACGACTTGAGAATTGACATGGCTAGGCTACAGCAAAGAATGAACAATATGCAGAGAATGCTGGAGGCCTGTATGGATATGCAGCTTGAGTTGCAGCGCTCAATAAGACAGGAGGTTTCTGCAGCCCTAAATCGCTCATCTGGTTCTTCAGATGTGCATGACCATGATTCACCAGATGACAAGTCTAAATGGGAATGTGTGAGAAAAGGACTGTGCTGTATATGCTGCGAGAGCAATATTGATTCTTTGTTGTACAGATGCGGGCACATGTGCACATGTTCAAAATGTGCCAATGAGTTGTTCCAAAGTAGGAGAAAGTGCCCAATGTGTCAAGCGCCTGTTGTGGAGGTGATACGTGCTTATTCTATACAATAA 2586 0.4439 MAIAGLHNLSVLDSSFLRDSHSQSPRRRGDGGSGSTRSSSILQMWREIDDEHVVGQVQGRPGDGLLQQRSDEFITDLSQASMPSSHETGARHAVEDSILGENDCETWSQSHSQHESPDEQEELNNSGCDNSSDLGEVERERVRQIFREWMKSGAGDRATNIPQCNSSSRSEWLGETEQERVRIIREWVQLSSQQRVIASGDSREEQSAEVGTQIDRVRDGFAVNQNEGQTEHMRRGIRKLCGRQVLLDMLKKAERERQREVQELLDHRAVSHFPHRNRIQALLRGRFLRNDRSVDANRSTSIAESELGLLRQKQTVSGLREGIFSGKDYSGGSQVTSTPSDTSSISGIDNNSNEQTDSSSLHSVLIVHFEQSEPTVGDSDGVGISDGQNFTHEPSTVNLDCQDSSAHTEGSSSQLLENESRDCQSSSGVEMERGGDSGLYVVGITVEDTTDRLVHQNCQIEVAEHGNMQGSSEVYPEELELGALSNYDNAPSTHNDVMEAAMLDNENRYVSTASEEQQQEELSENEGSDGNLRSGTEESLDDNHPHGTANEWPQDILSNEDGENSPLPEAQEMWQEDGGFQEAVENWLGGPSDHEVAPVGRIHGFYFPDDDNVNSVELRELLNRRSVSNLLRSSFRESLDQLIQSYVERQGHANAEWELQETSPSSASVERDLEQPRRDQIVDQEDTINSPLDQPSSPTPPQPLWERQSRHDNWSRVDMNNQRLGLRHSFSLEWEIINDLRIDMARLQQRMNNMQRMLEACMDMQLELQRSIRQEVSAALNRSSGSSDVHDHDSPDDKSKWECVRKGLCCICCESNIDSLLYRCGHMCTCSKCANELFQSRRKCPMCQAPVVEVIRAYSIQ 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0222 861 MobiDBLite consensus disorder prediction 656 675 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 327 359 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 656 670 - -
Mibi01g0222 861 Coils Coil 737 764 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 105 136 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 329 359 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 777 798 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 510 534 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 510 568 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 685 711 - -
Mibi01g0222 861 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 785 859 IPR013083 -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 17 40 - -
Mibi01g0222 861 SUPERFAMILY RING/U-box 808 854 - -
Mibi01g0222 861 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 861 - -
Mibi01g0222 861 Pfam Zinc finger, C3HC4 type (RING finger) 806 853 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 374 435 - -
Mibi01g0222 861 ProSiteProfiles Zinc finger RING-type profile. 809 848 IPR001841 -
Mibi01g0222 861 Coils Coil 243 270 - -
Mibi01g0222 861 CDD mRING-HC-C3HC5_NEU1 809 847 - -
Mibi01g0222 861 MobiDBLite consensus disorder prediction 382 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0222 Mibi-ChrMibi01 2160254 2164163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0222 809 855 C3H Transcription Factor Family AT3G06140 40.426 4.14e-06 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0222 01 2160254 2164163 Mibi07g0366 07 4497353 4501293 CCT
Mibi01g0222 01 2160254 2164163 Mibi01g0222 01 2160254 2164163 ECH