Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0214 ATGGAAGAGGAAATGGAGTTTGTGGGGCCCAATCATCATCATCATCATCACCATCATCACATAGCGAAGGGGAAGCGTACGAAGAGGAGGCAGAGGCCATCGTCGCCGTGCGCCGTGGTGGCCGCCATGACCTCCAGCTCATCATCAAGCGTCTCCGCCGCCGCCGACTATTACGACGACAGCACAGAGGAGGAGGAAGACATGGCCAACTGTCTGATTCTGTTGGCTCAGAGTGGGGATTCTGTTTCCCACCATCAACCACGTGGCGGCCCCAGATTGGCCGATATGTCCACCGTCACCGGCGCCGTGAAAGTTGGCTTGTTTGTGTACGAGTGCAAAACGTGTAAGAGAAGTTTTCCTTCGTTTCAAGCGTTGGGTGGGCACAGGGCCAGCCACAAAAAGCCTAAGATGACGTCAGACGACAACAAACCCCCGCCGCAGCCACAGCAATTTATGAACATTTATGAGAGTGAAGAAGGTCAGACGAAAAGCGGCCCACAAATTTGTCCGAACAACAACAACAACATGAACAACATGAAAATGAAGCTGAGGAAGATTCATGAGTGTTCAATATGCGGTTCAGAATTCACGTCCGGACAGGCATTGGGTGGCCACATGAGGAGGCATCGCCCATCCACCGCCGCCCTCCCGACGGCTGTACTGAAGCCAAGAGTGCTCGCTTTGGATCTAAACCTGCCGGCGCCGGAGGAGGATTCCAAGTTTGATCAGTTGACGGCGGCGGCGCCCAAAGGGAAACTACCATTGGTGCTGTCTGCTTCTCCGTCTTTGGTGGGATGCCATTATTAA 807 0.5378 MEEEMEFVGPNHHHHHHHHHIAKGKRTKRRQRPSSPCAVVAAMTSSSSSSVSAAADYYDDSTEEEEDMANCLILLAQSGDSVSHHQPRGGPRLADMSTVTGAVKVGLFVYECKTCKRSFPSFQALGGHRASHKKPKMTSDDNKPPPQPQQFMNIYESEEGQTKSGPQICPNNNNNMNNMKMKLRKIHECSICGSEFTSGQALGGHMRRHRPSTAALPTAVLKPRVLALDLNLPAPEEDSKFDQLTAAAPKGKLPLVLSASPSLVGCHY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0214 268 MobiDBLite consensus disorder prediction 12 32 - -
Mibi01g0214 268 ProSitePatterns Zinc finger C2H2 type domain signature. 112 132 IPR013087 -
Mibi01g0214 268 PANTHER ZINC FINGER PROTEIN ZAT5 32 243 - -
Mibi01g0214 268 Gene3D Classic Zinc Finger 107 209 - -
Mibi01g0214 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 187 214 IPR013087 -
Mibi01g0214 268 SMART c2h2final6 187 209 IPR013087 -
Mibi01g0214 268 SMART c2h2final6 110 132 IPR013087 -
Mibi01g0214 268 ProSitePatterns Zinc finger C2H2 type domain signature. 189 209 IPR013087 -
Mibi01g0214 268 MobiDBLite consensus disorder prediction 125 151 - -
Mibi01g0214 268 SUPERFAMILY beta-beta-alpha zinc fingers 109 209 IPR036236 -
Mibi01g0214 268 MobiDBLite consensus disorder prediction 1 36 - -
Mibi01g0214 268 ProSiteProfiles Zinc finger C2H2 type domain profile. 110 137 IPR013087 -
Mibi01g0214 268 Pfam C2H2-type zinc finger 109 135 - -
Mibi01g0214 268 Pfam C2H2-type zinc finger 187 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0214 Mibi-ChrMibi01 2088383 2089189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0214 20 268 C2H2 Transcription Factor Family AT2G28200 40.532 2.52e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi01g0214 zf-C2H2_6 2.5e-11 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0214 01 2088383 2089189 Mibi07g0361 07 4455074 4455757 CCT
Mibi01g0214 01 2088383 2089189 Mibi01g0214 01 2088383 2089189 ECH
Mibi01g0214 01 2088383 2089189 Mibi07g0361 07 4455074 4455757 ECH