Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0211 ATGGATGCTCATCAAGACCCTCTGATGCACATTGACGACTTCCAGCTTCATGACTTCATCGACGACACCAATTTCGATCAGTTTATCAATTTAATCCGTGGGGATCACAATGAACAATCATTCTGTAACTTTGATTCTGACCTTATCAATGGCTGCTTAGCTGATAATAACCAGTTTATTCCATTACCTGCAAACCCCTTTGAGTCTAATGCTGCTTTTAATGCATATGATCCAAGCTCCACACTTAGTTCCTTCTCATATTTTGATGGAGAAGTGAAGGGAGGAAGAGGAGAAGAAGAGAATGATTCATCTGCAACAACAATCACCACCACTGAAACTACAACACCTGATAATAATGCCAAACACAAGTCCAAAACTGATCGGTCAAAAACTCTGATTTCTGAAAGGAAGAGGAGAGGGCGAATGAAAGAGAAGCTTTATGCACTGCGTTCTTTGGTTCCCAACATAACTAAGATGGATAAGGCCTCCATAGTGGGAGATGCTGTAGCATATGTGCATGAGCTGCAAGAGAAAGCTAATAACCTGAAGGCTGAGATTAAAGGGCTTGAAGCATCACTGCTAGCGCCAGAAAATGATCATAGATCAGCTAAAATCCCCATGAATTTTCAAAACAACCAAATCATTAACTATCCAATCTGTAAGAAGATCATACAGATGGACATGTTTCAAGTGGAGGAAAGAGGGTTTTATGTAAAAGTAGTATGTAATAAAGGAGAAGGAGTGGCTACCTCCCTGTACAGGGCTCTAGAGTCCCTATCAGGCTTCAATGTTCAGAATTCAAACTTGGCTTCAGTTTCTGATAGATTTCTATTAACATTTACATTGAACGTGAAAAGTTGCGAGCCAGAAATGAACCAGCAAAATCTGAAGCTGTGGGTGGCAGGGGCTCTTGTAAACCAAGGCTTCGAATTTATTACAACTTTCCATGCTTGA 954 0.4057 MDAHQDPLMHIDDFQLHDFIDDTNFDQFINLIRGDHNEQSFCNFDSDLINGCLADNNQFIPLPANPFESNAAFNAYDPSSTLSSFSYFDGEVKGGRGEEENDSSATTITTTETTTPDNNAKHKSKTDRSKTLISERKRRGRMKEKLYALRSLVPNITKMDKASIVGDAVAYVHELQEKANNLKAEIKGLEASLLAPENDHRSAKIPMNFQNNQIINYPICKKIIQMDMFQVEERGFYVKVVCNKGEGVATSLYRALESLSGFNVQNSNLASVSDRFLLTFTLNVKSCEPEMNQQNLKLWVAGALVNQGFEFITTFHA 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0211 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 175 IPR011598 GO:0046983
Mibi01g0211 317 Gene3D - 117 192 IPR036638 GO:0046983
Mibi01g0211 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 194 IPR036638 GO:0046983
Mibi01g0211 317 MobiDBLite consensus disorder prediction 92 131 - -
Mibi01g0211 317 SMART finulus 132 181 IPR011598 GO:0046983
Mibi01g0211 317 MobiDBLite consensus disorder prediction 101 117 - -
Mibi01g0211 317 Coils Coil 172 192 - -
Mibi01g0211 317 Pfam Helix-loop-helix DNA-binding domain 133 176 IPR011598 GO:0046983
Mibi01g0211 317 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 14 307 - -
Mibi01g0211 317 FunFam Basic helix-loop-helix (BHLH) DNA-binding superfamily protein 122 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0211 Mibi-ChrMibi01 2043597 2044942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0211 1 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 52.812 4.35e-102 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g0211 HLH 4.9e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0211 01 2043597 2044942 Mibi01g0211 01 2043597 2044942 ECH