Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0198 ATGATTGGTTCACAGCACAAAGGAACCTACTGCCTCCAAACCCTAGATCTGATTCTTCGTTCTCTTCTCCGATCTCCTCTCCCACACCTCGATTATCCAAGGGTAAGGATGGTGTCGGACGCGAGCAAGAAGAAGGCGGCGCAGAAGAAGGCGGCCGCTGCTGCTAAGAGAGGAGGTAAGGCCGCGGCTGCTTCATCAAAAGCGGCGGCATCGGAGGCTCAGAAGGCTGCCGATAAGCTTGCTGATGGAGTCGGCGAAATCCACATATCCGATCGCACGTGCACCGGCGTCCTCTGTTCACATCCTCTTTCGAGGGATATTAGGATAGAATCTCTATCAGTTACTTTTCATGGACATGATCTTATTGTTGATTCTGAATTGGAGCTAAATTATGGAAGACGCTATGGGCTACTTGGATTAAATGGTTGTGGAAAATCGACTCTGCTGACAGCATTAGGTTGTCGGGAGCTTCCAATTCCTGATCACATGGATATTTATCACCTTTCTCGAGAGATTGAAGCTTCTGACATGTCTGCATTGCAGGCTGTCATAAGCTGTGATGAAGAAAGGTTGAAATTGGAGAAAGAAGCTGAAATTTTGGCAGCACAGGATGATGGAGGTGGTGAAAGTCTGGAACGTGTCTATGAACGATTGGAAGCTATGGATGCAGCAACTGCAGAAAAGCGTGCTGCTGAAATTTTACATGGTCTTGGTTTTAACAAGCAGATGCAAGCAAAGAAGACACGTGATTTTTCTGGTGGTTGGAGAATGAGGATAGCTCTAGCACGTGCTCTGTTTATGAACCCAACCATTCTTTTACTTGATGAACCAACTAATCATTTAGATCTGGAAGCATGTGTGTGGCTGGAGGAAAATTTGAAGAAGTTTGACCGTATCCTGGTTGTTGTTTCACATTCTCAAGATTTTCTCAATGGTGTTTGCACAAACATCATCCACATGCAAAACAGAAAGCTGAAGATGTACACTGGTAATTTTGATCAGTATGTTCAGACACGTGCTGAATTGGAAGAAAACCAGATGAAGCAGTACAAGTGGGAACAGGAGCAGATTTCCTCAATGAAGGAATATATTGCTCGGTTTGGGCATGGATCTGCTAAGCTCGCTCGCCAAGCTCAAAGTAAAGAGAAAACACTGGCAAAAATGGAACGAGGTGGACTTACTGAGAGGGTTGTCAGAGATAAAGTCTTGGTGTTTCGCTTTGTTGATGTGGGAAAGCTCCCCCCACCTGTGCTTCAGTTTGTTGAGGTGTCTTTTGGTTACACCCCAGATAATCTCATCTACAAAAACATTGACTTTGGGGTGGACTTAGACTCTAGGATTGCACTCGTTGGGCCCAATGGAGCTGGGAAGAGTACACTCCTGAAGCTAATGACTGGGGATCTGGTTCCTGCTGATGGCATGGTCCGACGTCACAACCATCTTCGCATTGCGCAATTTCATCAGCACCTGGCTGAAAAGCTAGACATGGAAATGTCTGCCCTCCAGTATATGATAAAAGAGTACCCTGGAAATGAGGAAGAGAAAATGAGGGCAGCTATTGGGAAGTTTGGACTGTCAGGTAAAGCCCAGGTGATGCCTATGAAGAATTTATCAGATGGGCAGAGGAGCCGGGTAATTTTTGCTTGGTTAGCTTGGAGGCAGCCTCACTTGCTGCTTCTGGATGAACCGACAAACCATTTGGATATTGAGACAATTGACTCTTTGGCTGAGGCATTGAATGAATGGGATGGTGGGATGGTGCTTGTTAGTCATGATTTTAGGCTCATAAATCAAGTGGCCCATGAGATATGGGTGTGTGCAAATCAATCTGTGACCAGATGGGATGGTGACATTATGGAATTCAAGGAGCATCTAAGGGCCAAGGCAGGTTTATCTGATTGA 1902 0.4569 MIGSQHKGTYCLQTLDLILRSLLRSPLPHLDYPRVRMVSDASKKKAAQKKAAAAAKRGGKAAAASSKAAASEAQKAADKLADGVGEIHISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTALGCRELPIPDHMDIYHLSREIEASDMSALQAVISCDEERLKLEKEAEILAAQDDGGGESLERVYERLEAMDAATAEKRAAEILHGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKMYTGNFDQYVQTRAELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTERVVRDKVLVFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLVPADGMVRRHNHLRIAQFHQHLAEKLDMEMSALQYMIKEYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCANQSVTRWDGDIMEFKEHLRAKAGLSD 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0198 633 Pfam ABC transporter 318 390 IPR032781 -
Mibi01g0198 633 SMART AAA_5 443 631 IPR003593 -
Mibi01g0198 633 SMART AAA_5 131 333 IPR003593 -
Mibi01g0198 633 CDD ABCF_EF-3 418 609 - -
Mibi01g0198 633 ProSitePatterns ABC transporters family signature. 251 265 IPR017871 GO:0005524|GO:0016887
Mibi01g0198 633 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 418 633 IPR003439 GO:0005524
Mibi01g0198 633 FunFam Abc transporter f family member 1 107 371 - -
Mibi01g0198 633 Pfam ABC transporter 125 279 IPR003439 GO:0005524
Mibi01g0198 633 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 107 347 IPR003439 GO:0005524
Mibi01g0198 633 CDD ABCF_EF-3 107 324 - -
Mibi01g0198 633 Gene3D - 107 371 IPR027417 -
Mibi01g0198 633 Pfam ABC transporter 434 565 IPR003439 GO:0005524
Mibi01g0198 633 FunFam ATP-binding cassette sub-family F member 3 378 632 - -
Mibi01g0198 633 Gene3D - 395 631 IPR027417 -
Mibi01g0198 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 350 IPR027417 -
Mibi01g0198 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 613 IPR027417 -
Mibi01g0198 633 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 50 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0198 Mibi-ChrMibi01 1945195 1949353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0198 127 305 Calmodulin-binding Proteins AT2G36910 26.630 5.36e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0198 01 1945195 1949353 Mibi01g0198 01 1945195 1949353 ECH