Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0183 ATGGGCCCTCGCAAGCGGGGAAATAGTATCACCATTGAGCCTCTTCTGGTAAGCACATCATCATCATCCCTGTATATTGTTTGTAATTACAATATACACCCCTGTATATTCTCTGGCTTCATTCATGTTGGTGGAATATGCACAGAGGATGGGTTCAACTACGACCCGAAAAGTGATAATGGGCCGGCTCATTGGGGAGACATTCGATCCGAGTGGTACATGTGCAAAAATGGAAGCGCACAATCTCCCATTAATCTCCACAATCATACGGTCAACCTTGCATCCCATTTAGGCCCCCTCCGCATTAAGTATCACACCTCTAATGCCTCTCTTTTCAATACCGGCCATGATATTAGGGTAATGGATGATTTGATACACATTTCTGAAGATAGGGATGCAATAATACCAATGGGTGTGGTTGATCTAGAGCGTATGGCATGTAATACACGCTCAAGTAGCAAGTTTAAGGATGTAGAAAATAATAATGGAAGACACTCAAGCTCTTCTGCATCTGGTGCAAATGATCTCAAAAGGTCTGCTAGAAAGACATCATTAAGGGTGTTTTCAATTCCTTCAGGAACTCGGAAGTCTGAGCGTTTACTGGAAAGGACAACGCCAACTAACACAAAGAGAAGGAAATTTGAGAGGTCTAAGAAACCAAAGATGCCGAGTCCTATGAGGAGATCCAAAAGAATTAAGAAGGACTCTACTTTGATGACAGAGGATATTGCACCTAAATGCAAGACAGATTCCTTTAGATTTGTGGAGTATTGGCTTCCTGTACAGATATCCGAAGTGCAGCTTGAACACTATTGTTCTACTTTAGTTTCAAATGCTTCAGTTCTTCGGTCATCATCAAAAAATGATAGTATCGGGGCCCTTCAAGACCTTCTCATTTCAACTCGGAAGTGTTGTAATCACCCTTACGTTGTTGATCCATTGTTACAAACACTGCTTACCAAAGGCCTACGGGCGGTTGATTACTTGGACGTTGGAATAAAAGCTAGTGGCAAGTTGCAAGTTCTTGATTCAATGCTTATGGAGTTGAAAAAGAGGGGTCTGAGGGTACTCATTCTTTTTCAGTCTGTAGCTGGTTCTAGAAAGGATTCCATAGGAGACATTTTGGATGATTTCTTGCTTCAAAGATTTGGTTCAGATGCTTATGAGCGGGTTGACAAAGGTGTCTTGCATTCTAAGAAGCTAGATGCCTTGACTCAGTTCAACAATAATGAGAGTGGAAGATTTATTTTTTTATTAGAAGCATGTGCCTGCTTTCCAAGCATCAAATTGTCATCAGTTGATATCATTATTATTTTTAATAGTGATTGGAATCCAGTGAATGATATACGATCCCTTCAGAGGATAACGCTTGATTCACAGTCTGAACAGATAAAAATATTTCGTTTGTATTCACGTTTCACTGTTGAAGAAAATATCCTAATTCTTGCTAAGCAAGGTAAGATACTTGAAAGCAATTTGCTGAACATGAGCTGGAGTATGAGTCATATGTTGTTGATGTGGGGTTCATCTTGTCTATTTGATAATTTGAGACTTATTCATGATGGCGAAAGTTCTAGTTCGTGTTCCAATTATTCATTTGAAGACCCCGGACAACTTTTCAAGGAAGCACTCCGTGAGTTCTCATCCTTACTTTTGCAAGACAGTGGGTGTAATGATACAATCAGCTGTTCAATCATATTGAAAGTCCAGCTAAATGAAGGAAAATACTGTACAAATTTTGCTTTGCTTGGTGAGAAAAAACTTGGATCTCCCGGTGAAGGATTACCCAATTTGTTTTGGACTAAACTTTTAAAGGGAAAAGTTCCTCAATGGAAAGACTCATGTGATTCATCTCAACGGACTCGTCGAAGGGCTCATCATGATGGTGGTTCATTATATGCTCCCAACTTTGAGAGAGAAGAAATAGCAAGGAAACGCAGGAAAGTGATAGCTAATGCCGTAGATGAGCCACCTTCAAATTTTCAAGGTGGAAAGTCATCAACTGGAAACGAGGAAGAGGAGCTTACATCTCTTACTGATGCCAGGGATAGCAAAGCTTTGTGA 2064 0.4026 MGPRKRGNSITIEPLLVSTSSSSLYIVCNYNIHPCIFSGFIHVGGICTEDGFNYDPKSDNGPAHWGDIRSEWYMCKNGSAQSPINLHNHTVNLASHLGPLRIKYHTSNASLFNTGHDIRVMDDLIHISEDRDAIIPMGVVDLERMACNTRSSSKFKDVENNNGRHSSSSASGANDLKRSARKTSLRVFSIPSGTRKSERLLERTTPTNTKRRKFERSKKPKMPSPMRRSKRIKKDSTLMTEDIAPKCKTDSFRFVEYWLPVQISEVQLEHYCSTLVSNASVLRSSSKNDSIGALQDLLISTRKCCNHPYVVDPLLQTLLTKGLRAVDYLDVGIKASGKLQVLDSMLMELKKRGLRVLILFQSVAGSRKDSIGDILDDFLLQRFGSDAYERVDKGVLHSKKLDALTQFNNNESGRFIFLLEACACFPSIKLSSVDIIIIFNSDWNPVNDIRSLQRITLDSQSEQIKIFRLYSRFTVEENILILAKQGKILESNLLNMSWSMSHMLLMWGSSCLFDNLRLIHDGESSSSCSNYSFEDPGQLFKEALREFSSLLLQDSGCNDTISCSIILKVQLNEGKYCTNFALLGEKKLGSPGEGLPNLFWTKLLKGKVPQWKDSCDSSQRTRRRAHHDGGSLYAPNFEREEIARKRRKVIANAVDEPPSNFQGGKSSTGNEEEELTSLTDARDSKAL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0183 687 Pfam Eukaryotic-type carbonic anhydrase 60 120 IPR001148 -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 212 228 - -
Mibi01g0183 687 CDD SF2_C_SNF 336 455 - -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 153 180 - -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 638 652 - -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 614 687 - -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 659 674 - -
Mibi01g0183 687 Gene3D - 252 489 IPR027417 -
Mibi01g0183 687 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 253 646 - -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 153 178 - -
Mibi01g0183 687 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 341 504 IPR001650 -
Mibi01g0183 687 Gene3D Alpha carbonic anhydrase 48 169 IPR036398 -
Mibi01g0183 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 495 IPR027417 -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 196 211 - -
Mibi01g0183 687 SUPERFAMILY Carbonic anhydrase 52 121 IPR036398 -
Mibi01g0183 687 MobiDBLite consensus disorder prediction 196 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0183 Mibi-ChrMibi01 1780584 1790641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0183 390 489 RAD5 or RAD16-like Gene Family AT5G05130 26.733 7.48e-07 50.8