Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0180 ATGGATCATACGCCTCTGTTGAAAAAGATGAAGCTTCAATTCAAAGTTGCTCTTGCTTTTGTTATTACCTCGCTCTGGATTCAACCCTCATTCTGTGATGGATCTTCTGGGAGCCTAAACAAATGGATATGTAGATGTTCTTTTCAAGGGAACCAGAGTTCCTCTCTTTCTAACTGTTCTACATCATGTGATTGCCGTTTAGATGTCAAAGATAGTGCATCCTTATGGACATGCTTATGTGACCCCAATGGTTTTCCTAATGTGGAAGCAGATGGTCATAGTTCGAATTGCTTTACTGCCTGCAACTGCAGCTGGGGAGCTCTCACCATCTCACAAGGTTCAAAGAAACACGTTTCCAGCAAGATTGTTATAATTATATTATTACTATGTGTTATATGCACAACTGTTGCGTTTCTTGCCTCAATCATATGCTATGTATACCAAAGGGACAGATGTCCTATTCAATCACCCATATTATCATCAGACAACGGGACAAGTTATAATAGCACTGCCATCTTAATTAGCAATAGAACTTCAGTGTCAGAAACAAAAGCTGTTACAAATTCTACCATCAATCCGATATCAGGATGTTTTCAGATGGCCTCTTTCTTGTGTGGGAGCAAAGAAGAAACTTTTCATGGAAATATTATTCAATTTTCATTTGCAGTGCTAGAAAACGCCACTGACAAATTTTCGGCTTCAAACCTGATTGGACTAGGCAGAAGTAGTTATGTATACCGTGGTCGAATGAAGAGTGGTACTAATGTGGCAGTGAAGCGAATAAAAGCCCAAGGGGGGACTGAAGCAGACTCTGAGTTTTTGACAGAAATTGAACTACTATCCAGACTTCATCATTGTCACCTGGTGCCTTTGCTTGGATACTGCTTAGCATCAAAAGGAAGACATGTCGAGAGGTTACTCGTATTTAAGTACATGGCTAACGGTAATTTAAGAGACTGTTTGGATGGAGTTTCTGGAAGAAGTCTGGATTGGGCTACCCGTGTTAAAGTTGCAATGGGAGCTGCAAGGGGACTGGAATATCTACATGAAGCAGCTGCTCCAAAAATTCTGCATAGAGATGTTAAATCAACAAACATTCTTCTGGATGAAAATTATCAAGCAAAAATTACCGATCTTGGTATGGCTAAAAACTTAAGAGCTGATGACTTCCCCAGCCGTTCAAATTCTCCTGCTAGAATGCAGGGCACATTTGGTTATTTTGCACCTGAGTATGCAATTGTTGGAAGAGCCTCTCTAAAGTCAGACATCTTCAGTTTTGGGGTGGTTCTTCTTGAGATTATCAGTGGTCGTCACCCTATCTATAAATCTAGAGGCAGAGAAGAAAGCCTTGTCATATGGGCTGCTCCTCTCTTACAAGATAAAAGACGCATAGTAACCGAGTTAACTGACCCACAATTAAATGGAAACTTCCCAGAAAAAGAGATGCAGATAATGGCATATTTGGCTAAGGAATGTTTGCTGCTGGATCCTGATACGCGACCAACCATGAGTGAAGTCGTTCAAATTCTTTCAACTATATCTCCAGACAAATCCAAGAGGACAAGAAACATTCCAGTGAATCTTTTCCAGGAACCAAAGAGTTCAGAGAAGCTAAAGCAAGTTCCATCTTGTAAAGTAGATATTGACCACAATCTTTGGGTTGGAAACTTGAATTATGAAGCAGATATAGTTTCTGCCGAGTATACGGATAGTTTGGCCTTTGTGACTTCAAAAGCTGAGAGCTGGTATAGTTCAGAGGAAGAGATTGTAGACCTAGCTGAGCCTCGGTACGAATCATTTTGTGTGACAAACGTTAGTTCTTCCTCATAA 1830 0.4044 MDHTPLLKKMKLQFKVALAFVITSLWIQPSFCDGSSGSLNKWICRCSFQGNQSSSLSNCSTSCDCRLDVKDSASLWTCLCDPNGFPNVEADGHSSNCFTACNCSWGALTISQGSKKHVSSKIVIIILLLCVICTTVAFLASIICYVYQRDRCPIQSPILSSDNGTSYNSTAILISNRTSVSETKAVTNSTINPISGCFQMASFLCGSKEETFHGNIIQFSFAVLENATDKFSASNLIGLGRSSYVYRGRMKSGTNVAVKRIKAQGGTEADSEFLTEIELLSRLHHCHLVPLLGYCLASKGRHVERLLVFKYMANGNLRDCLDGVSGRSLDWATRVKVAMGAARGLEYLHEAAAPKILHRDVKSTNILLDENYQAKITDLGMAKNLRADDFPSRSNSPARMQGTFGYFAPEYAIVGRASLKSDIFSFGVVLLEIISGRHPIYKSRGREESLVIWAAPLLQDKRRIVTELTDPQLNGNFPEKEMQIMAYLAKECLLLDPDTRPTMSEVVQILSTISPDKSKRTRNIPVNLFQEPKSSEKLKQVPSCKVDIDHNLWVGNLNYEADIVSAEYTDSLAFVTSKAESWYSSEEEIVDLAEPRYESFCVTNVSSSS 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0180 609 ProSitePatterns Protein kinases ATP-binding region signature. 237 259 IPR017441 GO:0005524
Mibi01g0180 609 CDD STKc_IRAK 237 510 - -
Mibi01g0180 609 SMART serkin_6 231 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0180 609 FunFam receptor-like serine/threonine-protein kinase NCRK 205 311 - -
Mibi01g0180 609 Pfam Protein tyrosine and serine/threonine kinase 234 510 IPR001245 GO:0004672|GO:0006468
Mibi01g0180 609 Gene3D Phosphorylase Kinase; domain 1 204 311 - -
Mibi01g0180 609 FunFam receptor-like serine/threonine-protein kinase NCRK 312 522 - -
Mibi01g0180 609 SUPERFAMILY Protein kinase-like (PK-like) 211 510 IPR011009 -
Mibi01g0180 609 PANTHER OS01G0750732 PROTEIN 41 531 - -
Mibi01g0180 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Mibi01g0180 609 ProSiteProfiles Protein kinase domain profile. 231 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0180 609 Gene3D Transferase(Phosphotransferase) domain 1 312 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0180 Mibi-ChrMibi01 1745961 1751651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0180 10 605 Receptor kinase-like Gene Family AT2G28250 53.987 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Mibi01g0180 PK_Tyr_Ser-Thr 2e-43 CL0016