Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0160 ATGCCTCGTCGACGGCAAGTCGTTGTTGTCGTTTCGCTCACTACTCTTCTCCTCATCTCACTGTTCACTCTGTCTTCATGCAAGGCCATCGAAAATGACGATGACGAAGAAGATCTCAGCTTTCTCGATGAAGCTGACGACACCTCTTCTTCCCATTACCACCATCCGGATCCGGCCCACTCCGACGACGAAGATTTCTACGACGATGATTTCGATGACTTCTCTAGCTACGACGAATCGGGGACCAATCAAGAGGCTTACAAACAGCCTGAGGTGGATGATAAGGACGTCGTCGTTTTGAAGGAGAGGAATTTCAGCGACGTTGTGGAGAATAATCGGTTTGTGATGGTGGAATTTTACGCTCCCTGGTGTGGTCACTGCCAGGCTTTGGCGCCAGAATATGCTGCTGCGGCCACGGAGTTGAAGTCTGAGAATGTGGTTTTGGCTAAGGTGGATGCGACTGAGGAGAATGAATTGGCTCATGAGTACGATGTTCAGGGGTTCCCCACTGTCTACTTTTTCCTCGATGGGGTTCACAAGCCTTATACTGGTCAGAGAACCAAGGATGCCATAGTGACCTGGATTAAGAAGAAGATAGGGCCTGTTATTTACAACGTAACTACATTGGATGATGCTGAACGCATATTGACCTCTGAAAGCAGAGTTGTTTTGGGCTTCCTCAACTCTTTGGTTGGTCCTGAGAGTGAGGAGCTAGCTGCTGCTTCAAGACTCGAGGATGATGTAAATTTTTATCAAACCGTGAATCCTGATGTGGCAAAGCTTTTCCATATAGATCCAAATGTTAAACGCCCTGCTTTGGTCCTTCTCAAAAAAGAGGAGGAGAAGTTAAACCATTTTGGTGGTGAATTTGTAAAATTTAAAATATCGGACTTTGTATTGGCCAACAAACTTCCTTTGGTCACAACTTTTACAAGAGAAAATGCCCCCTCAATTTTTGAAAGTTCAATCAAGAAACAGTTGCTGCTGTTTGCAACTTCAAATGATTCGAAGAAGTTTGTCCCAGTATTCCAAGAAGCAGCAAAGTTTTTCAAGGGAAAGCTAATCTTTGTGCATGTGGAGATGGATAGTGAAGATGTTGGAAAGCCTATTGCTGATTATTTTGGCGTAACTGGAAATGCTCCCAAAGTACTCGCATACACAGGAACTGATGATGGAAAGAAATTTGTGCTTGATGGAGAGGTGACCAGAGATAAAATTAAGGCATTTGGGGAAGATTTCCTTGAAGACAAGCTAAAACCTTTTTATAGATCTGATCCTGTCCCTGACAGTAATGATGGTGATGTAAAAATAGTTGTTGGGGATAATTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTCCTCCTTGAGATTTATGCTCCCTGGTGTGGTCATTGCCAAGCACTGGAACCAACATACAACAAACTGGCAAAACATCTGCGTGGCATTGAGTCTCTAGTAATAGCCAAGATGGATGGAACAACAAACGAGCACCCAAGGGCAAAGGCTGATGGATTCCCTACTCTTCTGTTCTACCCAGCAGGGAACAAGACTTCTGATCCTGTTACTGTTGATGCAGATCGTACGGTGGTGGCCTTGTATAAATTTCTCAGAAAACATGCATCTATCCCATTCAAGCTTGAGAAACCAGTCTCAACTCCAAAGCCCGAGAGTACAGACGCCAAGAAGAGTCAGGGTAGCAGCAGCGACGTGAAAGATGAACTATGA 1728 0.4439 MPRRRQVVVVVSLTTLLLISLFTLSSCKAIENDDDEEDLSFLDEADDTSSSHYHHPDPAHSDDEDFYDDDFDDFSSYDESGTNQEAYKQPEVDDKDVVVLKERNFSDVVENNRFVMVEFYAPWCGHCQALAPEYAAAATELKSENVVLAKVDATEENELAHEYDVQGFPTVYFFLDGVHKPYTGQRTKDAIVTWIKKKIGPVIYNVTTLDDAERILTSESRVVLGFLNSLVGPESEELAAASRLEDDVNFYQTVNPDVAKLFHIDPNVKRPALVLLKKEEEKLNHFGGEFVKFKISDFVLANKLPLVTTFTRENAPSIFESSIKKQLLLFATSNDSKKFVPVFQEAAKFFKGKLIFVHVEMDSEDVGKPIADYFGVTGNAPKVLAYTGTDDGKKFVLDGEVTRDKIKAFGEDFLEDKLKPFYRSDPVPDSNDGDVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIESLVIAKMDGTTNEHPRAKADGFPTLLFYPAGNKTSDPVTVDADRTVVALYKFLRKHASIPFKLEKPVSTPKPESTDAKKSQGSSSDVKDEL 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0160 575 FunFam Protein disulfide-isomerase 430 543 - -
Mibi01g0160 575 FunFam Protein disulfide-isomerase 304 429 - -
Mibi01g0160 575 SUPERFAMILY Thioredoxin-like 431 542 IPR036249 -
Mibi01g0160 575 MobiDBLite consensus disorder prediction 45 62 - -
Mibi01g0160 575 Pfam Thioredoxin-like domain 238 409 - -
Mibi01g0160 575 Gene3D Glutaredoxin 429 543 - -
Mibi01g0160 575 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Mibi01g0160 575 Gene3D Glutaredoxin 304 428 - -
Mibi01g0160 575 TIGRFAM ER_PDI_fam: protein disulfide isomerase 95 575 IPR005792 GO:0003756
Mibi01g0160 575 CDD PDI_b_family 203 302 - -
Mibi01g0160 575 FunFam protein disulfide-isomerase A2 199 303 - -
Mibi01g0160 575 PANTHER PROTEIN DISULFIDE ISOMERASE 22 574 - -
Mibi01g0160 575 SUPERFAMILY Thioredoxin-like 90 201 IPR036249 -
Mibi01g0160 575 PRINTS Thioredoxin family signature 115 123 - -
Mibi01g0160 575 PRINTS Thioredoxin family signature 123 132 - -
Mibi01g0160 575 PRINTS Thioredoxin family signature 164 175 - -
Mibi01g0160 575 SUPERFAMILY Thioredoxin-like 302 432 IPR036249 -
Mibi01g0160 575 Gene3D Glutaredoxin 200 303 - -
Mibi01g0160 575 SUPERFAMILY Thioredoxin-like 205 314 IPR036249 -
Mibi01g0160 575 ProSiteProfiles Thioredoxin domain profile. 78 200 IPR013766 -
Mibi01g0160 575 Pfam Thioredoxin 435 522 IPR013766 -
Mibi01g0160 575 Pfam Thioredoxin 97 197 IPR013766 -
Mibi01g0160 575 CDD PDI_b'_family 314 414 - -
Mibi01g0160 575 ProSitePatterns Thioredoxin family active site. 116 134 IPR017937 -
Mibi01g0160 575 MobiDBLite consensus disorder prediction 43 65 - -
Mibi01g0160 575 TIGRFAM pdi_dom: protein disulfide-isomerase domain 101 198 IPR005788 GO:0003756
Mibi01g0160 575 CDD PDI_a_PDI_a'_C 435 537 - -
Mibi01g0160 575 ProSiteProfiles Thioredoxin domain profile. 413 542 IPR013766 -
Mibi01g0160 575 CDD PDI_a_family 98 195 - -
Mibi01g0160 575 ProSitePatterns Thioredoxin family active site. 455 473 IPR017937 -
Mibi01g0160 575 MobiDBLite consensus disorder prediction 547 575 - -
Mibi01g0160 575 FunFam Protein disulfide-isomerase 86 198 - -
Mibi01g0160 575 Gene3D Glutaredoxin 84 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0160 Mibi-ChrMibi01 1606565 1610236 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0160 01 1606565 1610236 Mibi07g0283 07 3514919 3522929 CCT
Mibi01g0160 01 1606565 1610236 Mibi01g0160 01 1606565 1610236 ECH