Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0155 ATGGATTGTTGTAATTGCTTCTGGTTCATCCGAAAATCTACACAGCAGAGTGTTAAATTTGGTATCAATAATAATCTCTCCGAGGAGCTGTTGTTGGATGAAGATATTGAAGATGGCTATGGCTCGTATGATGGGGACGCTAGTAACATCACCAGTGGAGATGATAGTGAAGTACAAATTCATGCCAACCGGTCTGAGGATATTTTGAAATGGAGAGCAGAGAATGACATGATTTGTAGGCAGTTTCTTGTTAAGGAAACTCACAAAGTTGTTCGCACAGAGGATGAAAATGGAAACAAGATGATAAATGAGTATGTTCGTGAATATAAGATAGGTTCTGGAAGCTATGGCAAAGTGGTTTTATATCAAAGTTCTGTTGATGGCAAGCACTATGCAATCAAGGTAAGAACTGTTTATGGTGTGGCGAGGCTGTGGATTGCCATTTTTCACAAGTCTTATTTACTGAAGGTACGAGTTGCAGCCTCAGAGACTGCCATGACAGATGTTCTGCGTGAGGTACTCATCATGAAAACAGTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCAGATCACTTTTACATGGTTCTTGAATATGTGGAAGGAAAATGGGTCTGTGAGGGTACAGGGCCTCTTTGTGGCTTAGGTGAAGAGACTGCTAGGAGATACTTGCGTGACATTATTTCCGGATTAATGTATCTACATGCTCATAATATTGTGCATGGAGATATTAAACCTGATAATCTGTTGGTTACTCGCCATGGGATGGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCATTTGAGGATGATAATGATGAACTTCGTCGGTCCCCTGGCACTCCTGTTTTCACTGCACCAGAATGTCTTCCCTATCATGGTAAAGCTGCAGACACATGGGCAGTAGGAGTTACTTTGTACTGTATGATCCTGGGTGAATATCCTTTTCTTGGTGATACTCTTCCAGATACTTACGATAAAATAGTCCATAATCCTTTAGTCCTCCCTGATAATTTGAACCTGCAATTGAAGAAGTTGCTAGAAGGACTACTTTGCAAAGATCCAAAACTAAGGTTGACATTAGGTGAAGTTGCAAAGCACAGCTGGGTTATAGGAGACGATGGACCAATTCCTGAGTACTTGTGTTATTGTAAACGCAAGAGATTGGAGAGGGAAGACTTAGATAGGAGCCACATACTTGCTTGA 1224 0.4134 MDCCNCFWFIRKSTQQSVKFGINNNLSEELLLDEDIEDGYGSYDGDASNITSGDDSEVQIHANRSEDILKWRAENDMICRQFLVKETHKVVRTEDENGNKMINEYVREYKIGSGSYGKVVLYQSSVDGKHYAIKVRTVYGVARLWIAIFHKSYLLKVRVAASETAMTDVLREVLIMKTVEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGPLCGLGEETARRYLRDIISGLMYLHAHNIVHGDIKPDNLLVTRHGMVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECLPYHGKAADTWAVGVTLYCMILGEYPFLGDTLPDTYDKIVHNPLVLPDNLNLQLKKLLEGLLCKDPKLRLTLGEVAKHSWVIGDDGPIPEYLCYCKRKRLEREDLDRSHILA 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0155 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Mibi01g0155 407 ProSiteProfiles Protein kinase domain profile. 105 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0155 407 Gene3D Transferase(Phosphotransferase) domain 1 95 400 - -
Mibi01g0155 407 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Mibi01g0155 407 SMART serkin_6 105 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0155 407 CDD STKc_LKB1_CaMKK 111 376 - -
Mibi01g0155 407 Pfam Protein kinase domain 162 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0155 407 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 68 378 - -
Mibi01g0155 407 SUPERFAMILY Protein kinase-like (PK-like) 100 396 IPR011009 -
Mibi01g0155 407 FunFam Serine/threonine-protein kinase GRIK2 95 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0155 Mibi-ChrMibi01 1571334 1575356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0155 100 383 CBL-interacting serine-threonine protein kinases AT4G24400 31.707 4.22e-40 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Mibi01g0155 Pkinase 1e-48 CL0016