Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0153 ATGGTTTCCGCCAAAATGTCGAAAACAGAAAAGCAAATCAGCAATGGACGAAGCTCAAAAACAGCGAGTAAATCAAGTAAGCCCCGAAAAGAAGGCTTGACGAAGAAGAACAGTAAACTCAATCTGAAGGACGATAAAGTTTCAATCTTTCCGTCTTCCACCACCGAGTTCTTGGAAGGAGTGAAAGGGCCTGAAATTGACGATAATGGGGCCACAAATGGGCGAGCCAACGGATTGAAACCCAAGAAACCTAAACGAAAGCAACAGGATGGCGATTACAAAGTTGTAGAGAAAGAAAACGCTAAAACGAATGAGCTTCCGCTGAGTCGAATCAAGAGAATAATGAAGGCAGAAGATCCCGAGTTACGTGTTTCTGAGGAAGCCGTCTTTCTCATCGGCAAAGCTACGGTGAAATTTCTCGAACTATTTACGCGGGAATCTCATGCTTGTTCTGTTCAGGATCGAAAGAAATCTCTTGATTACCAGCGCCTGTCAGATGTTGTTAGTAAGCAGAGGAAATATGACTTTCTTTTAGATTATGTTCCTGAGAAACTAAAAGCTGAGGATGCATTAAGAAAGCTGCAAGCAGCAATTGGGAAGGCCTGA 606 0.4307 MVSAKMSKTEKQISNGRSSKTASKSSKPRKEGLTKKNSKLNLKDDKVSIFPSSTTEFLEGVKGPEIDDNGATNGRANGLKPKKPKRKQQDGDYKVVEKENAKTNELPLSRIKRIMKAEDPELRVSEEAVFLIGKATVKFLELFTRESHACSVQDRKKSLDYQRLSDVVSKQRKYDFLLDYVPEKLKAEDALRKLQAAIGKA 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0153 201 MobiDBLite consensus disorder prediction 1 94 - -
Mibi01g0153 201 MobiDBLite consensus disorder prediction 24 43 - -
Mibi01g0153 201 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 105 165 IPR003958 -
Mibi01g0153 201 Gene3D Histone, subunit A 74 183 IPR009072 GO:0046982
Mibi01g0153 201 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 86 193 - -
Mibi01g0153 201 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g0153 201 SUPERFAMILY Histone-fold 106 182 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0153 Mibi-ChrMibi01 1564036 1566332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0153 73 164 CCAAT-HAP5 Transcription Factor Family AT1G07980 37.634 1.73e-13 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mibi01g0153 CBFD_NFYB_HMF 5.3e-12 CL0012