Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0141 ATGGGGGAGGAATCATACTTCGAATTCCTTATAGATAGCTACACTGTCTGGGTGTTCATGGAAATTGATCTGAACCATGCAGTGACTGAGGTTGAAAAGAATGCCTCCTGTGATGGCCACTGCGAGCAAGCCGCTTGTGCCTCATGTTTCTCCTCTACCACTTCTTCATCTTCCAATTCGCCTTCACCTCCTGCGTCTTCCTCTTATCTTGAACTCTGGCATGCTTGTGCTGGCCCCCTCACCTCCCTCCCTAACAAAGGAAATGTAGTTGTCTACTTCCCCCAAGGCCATCTTGAGCAGCTTGCCTCTTTCTCTCCTTTCTCCCCCATGGACATGCCCACCTATGACCTTCAACCTCAAATCTTCTGCACGGTCATCAGTGTCCAGCTTCTTGCCAACAAGGAGAATGATGAGGTTTATACGCAGGTTACTTTGCTTCCCCAGGCAGAGTTAGCAGGGGTGCACTTGGGCGGCCAGGAACTTGAGAAATTGGGAGCATGTGTGGAGGAAAATGGAGGATTACCTGCAAAATCAACCCCTCACATGTTCTGCAAAACGCTTACTGCTTCTGATACTAGCACTCATGGGGGTTTCTCTGTTCCTCGCAGAGCTGCTGAAGACTGCTTTCCTCCTTTGGATTATAAGCAGCAAAGGCCCTCCCAAGAACTTGTTGCAAAAGACCTGCATGGAGTAGAGTGGAAATTTCGCCATATTTACAGAGGTCAGCCTAGACGGCATCTGCTCACAACTGGCTGGAGTATTTTTGTCAGCCAAAAGAATCTTATATCTGGCGATGCGGTACTCTTTCTGAGGGGAGAAAGTGGAGAACTGAGACTGGGAATCAGGAGATCTGTTCGACCTAGAAATGGTCTTCCTGAGTCAGTTATTGGTGATCAGAATTGCTATCCCAATTTCCTATCTTCAGTGGCTAATGCTATGACCACCAAAAGCGTGTTTCATGTTTTCTACAGCCCAAGGGCAAGTCATGCAGAGTTTGTTGTCCCCTACCAGAAATATGTCAAAAGCATCAAGAATCCAGTGACCATTGGAACAAGATTTAAGATGAAATTTGAAATGGATGAATCTCCCGAAAAAAGATGTAATGGTGGTATAGTGACTGGAATGCGTGATTTGGATCCCTATAGGTGGCCTAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATATTGCTACTAACCATGAAGATCGAATTTCTCCATGGGAGATTGAGCCTTCTGTTTCTCTCCCTGCCTTGAGCATTCAGTCATCTCCAAGGCTAAAGAAATTGCGGACAGGTCTACAAGCGGCCACATCAAGTCACCTCATGACCGGTAGGAGTTCTAATGATGAGATAGTGTCAGGTGGCGGTGCATTTATGGACTTTGAGGAGTCTGTAATATCACCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGCATCATACTATTTTGGGCGTGATGCATTGACCAACCAGCCAGATTTTGAGATGAGTCGTCTTGGTCATCCAAATCTTGCATCCACTGGATTAAGAAAGGCTACTGCTGCTGAACTTATGAGGGTTCACCCTTCTAGTTATGCAGGCTTTGCGGAGACTAGCAAGTTTCTTAGGGTCTTGCAAGGTCAAGAAATATGTCCACTGCAGTCCCTGAAAGGAAAGGCTGATTCTAACCTTGGGGCTTGGGGTAAACCCAATGCTAGTTGCACAACTTTCAACCAACGTCAGTCATCCAAACCCATCTTCAACACTTTAGTATCAGAAGGCCTTCAAACTGCTTATTTTCCTTATGGCGATATTCACCGAGCTGGTCAAAGTAATCTGTTGTGCTCTAAACCTGCAAATTTCCAGAGAGAGAATGCCCACACTCCTTCCACTCAGGCAGAGCTCTCAACAAAGGAAGTTGCACAGTCAGATCTCTCGAACAAGGATAAGCTGCAGGACAGTTTTTCTGCTGCTGCTACTTTAAGGATTCCAAGTGATGAAACTTTTGAGGGAAAGGCAAATGCCTGTAAACTATTTGGGTTTTCCTTATCTGGGGAAGGCAACTCTCAGATAAAGAGCTCTGCTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGTAGCTTAGTTGGAAGAGCCGTTGATCTCTCAAGACTGAACAGCTACAATGATCTGTTGAGTGAACTAGAGCGACTTTTTGGCATGGAAGGTCTTATAAAGGATCCTGACAAAGGATGGAGGGTCCTGTACACCGATAGTGAAAATGACATAATGGTTGTAGGGGATGACCCATGGCATGAATTCTGCAGTGTGGTGTCTAAGATCCATATATATACCCAAGAAGAAGTGGAGAAGATGACGATTGGGATGATCACAGATGATACCCAGAGCTGTTTGGAAGAGGCACCAGGAGTAATGGAGGCTTCCAAGTCCTCATCTGTGGGCCAGCCAGATTCTTCTCCGACAGGAGTCTGA 2463 0.4592 MGEESYFEFLIDSYTVWVFMEIDLNHAVTEVEKNASCDGHCEQAACASCFSSTTSSSSNSPSPPASSSYLELWHACAGPLTSLPNKGNVVVYFPQGHLEQLASFSPFSPMDMPTYDLQPQIFCTVISVQLLANKENDEVYTQVTLLPQAELAGVHLGGQELEKLGACVEENGGLPAKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGESGELRLGIRRSVRPRNGLPESVIGDQNCYPNFLSSVANAMTTKSVFHVFYSPRASHAEFVVPYQKYVKSIKNPVTIGTRFKMKFEMDESPEKRCNGGIVTGMRDLDPYRWPKSKWRCLMVRWDEDIATNHEDRISPWEIEPSVSLPALSIQSSPRLKKLRTGLQAATSSHLMTGRSSNDEIVSGGGAFMDFEESVISPKVLQGQENTGFASYYFGRDALTNQPDFEMSRLGHPNLASTGLRKATAAELMRVHPSSYAGFAETSKFLRVLQGQEICPLQSLKGKADSNLGAWGKPNASCTTFNQRQSSKPIFNTLVSEGLQTAYFPYGDIHRAGQSNLLCSKPANFQRENAHTPSTQAELSTKEVAQSDLSNKDKLQDSFSAAATLRIPSDETFEGKANACKLFGFSLSGEGNSQIKSSAKRSCTKVHKQGSLVGRAVDLSRLNSYNDLLSELERLFGMEGLIKDPDKGWRVLYTDSENDIMVVGDDPWHEFCSVVSKIHIYTQEEVEKMTIGMITDDTQSCLEEAPGVMEASKSSSVGQPDSSPTGV 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0141 820 Gene3D - 689 783 - -
Mibi01g0141 820 FunFam Auxin response factor 181 285 - -
Mibi01g0141 820 ProSiteProfiles B3 DNA-binding domain profile. 183 285 IPR003340 GO:0003677
Mibi01g0141 820 FunFam Auxin response factor 346 419 - -
Mibi01g0141 820 Pfam AUX/IAA family 690 778 IPR033389 -
Mibi01g0141 820 SMART B3_2 183 285 IPR003340 GO:0003677
Mibi01g0141 820 Pfam B3 DNA binding domain 183 284 IPR003340 GO:0003677
Mibi01g0141 820 CDD B3_DNA 181 283 IPR003340 GO:0003677
Mibi01g0141 820 ProSiteProfiles PB1 domain profile. 694 778 IPR000270 GO:0005515
Mibi01g0141 820 SUPERFAMILY CAD & PB1 domains 697 773 - -
Mibi01g0141 820 ProSitePatterns 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 IPR006058 GO:0051537
Mibi01g0141 820 SUPERFAMILY DNA-binding pseudobarrel domain 175 293 IPR015300 -
Mibi01g0141 820 Gene3D - 347 420 - -
Mibi01g0141 820 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 68 783 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mibi01g0141 820 MobiDBLite consensus disorder prediction 800 820 - -
Mibi01g0141 820 Gene3D - 181 285 IPR015300 -
Mibi01g0141 820 FunFam Auxin response factor 689 783 - -
Mibi01g0141 820 MobiDBLite consensus disorder prediction 805 820 - -
Mibi01g0141 820 Pfam Auxin response factor 309 391 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0141 Mibi-ChrMibi01 1469070 1474780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0141 65 818 B3 DNA Binding Superfamily AT5G60450 58.954 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mibi01g0141 AUX_IAA 1.9e-07 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0141 01 1469070 1474780 Mibi01g0141 01 1469070 1474780 ECH