Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0135 ATGGAAGGAAGTGACGCAAACACTTGTATCTCACAATCCCCCACAAATTCCTCTTCCACCACCCCACAAGTTATCGCAAGCCCTTGTGCTGCCTGCAAAATCCTTAGGCGTCGATGTGCCGAGAAATGTGTTCTTGCTCCTTATTTCCCTCCCACTGACCCCGCCAAATTCACCATCGCCCACCGTGTTTTCGGTGCCAGCAACATCATCAAGTTCTTGCAGGATCTTCCGGAGAATCAGAGAGCTGATGCTGTGAGCAGTATGGTGTACGAGGCAAGTGCTAGAATAAGAGACCCCATATATGGGTGTGCTGGTGCCATTTGCCAGCTTCAGAAGCAAGTGAATGAGCTTCAAGCACAGCTTGCCAAGGCTCAAGCTGAGCTGGTGAACATGCAATTACAGCAAGCCAATCTTGTTGCTCTAATTTGCATGGAAGTGTCTAACACCTCTTCAACTCCTCTTCAATCAGAATCTCCACAGCATTCTGTGGATGAGTTTATTTCAACTCCTCCTCACTCCAACGCATATCAGAGCAACCTCAACTTCTTTGATGACAGCACTAGCTTTAACTCACTCTGGGAGCCTCTCTGGACATGA 597 0.4824 MEGSDANTCISQSPTNSSSTTPQVIASPCAACKILRRRCAEKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQDLPENQRADAVSSMVYEASARIRDPIYGCAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALICMEVSNTSSTPLQSESPQHSVDEFISTPPHSNAYQSNLNFFDDSTSFNSLWEPLWT 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0135 198 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g0135 198 ProSiteProfiles LOB domain profile. 27 128 IPR004883 -
Mibi01g0135 198 Pfam Lateral organ boundaries (LOB) domain 28 125 IPR004883 -
Mibi01g0135 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 27 162 - -
Mibi01g0135 198 Coils Coil 107 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0135 Mibi-ChrMibi01 1419861 1420569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0135 24 198 AS2 family AT2G28500 63.243 2.77e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mibi01g0135 LOB 2.5e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0135 01 1419861 1420569 Mibi07g0252 07 3225425 3226701 CCT
Mibi01g0135 01 1419861 1420569 Mibi01g0135 01 1419861 1420569 ECH