Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0132 ATGGATCCTTCCCGTGTACAACACCAGCAAATGTCTAACCAATCATTGGAGAACATGATAGCTTGCTCAAAAGCGCAGCAAGAGAGGAAGCCGAGGCCTCAGCCAGAAGAAGCACTGAAATGCCCGAGATGTGACTCCACCAACACCAAATTCTGTTACTACAACAATTACAGTCTCTCTCAGCCAAGATACTTCTGCAAGTCATGCAGGAGATATTGGACCAAAGGAGGTACATTGAGGAATGTTCCCGTGGGTGGAGGCTGCAGGAAGAACAAGAGATCTTCTTCTTCAAAGAGGGCTCAAGATCAACCACTCACCCCCCACAACAACCCTCTCGGTGCCATCCCTTCATTGTCTTATGATTCTAATGACCTTACCCTCGCATTAGTTAGGCTCCAAAAACAATCTACTGGGCAATTGGGTTTTGATGACCATGATCTTTCAATTTTAGGGAACCCCACCAGCTCCCATTTTGATATTCTTGGCAACACCGCAAATCCTGGGTTTTTAGATGCATTTAGAAGTGGGTTCGTGGAAACCCATCAGCAGAATAATAATTTGCAGAATCTGTATTGTGGATATGGAAATGGGGACCTGGGAGAGGTGGACAATGGCAGCACTGAGATGATGCTCCCTTATGATCAGGAAATCAATAACAATGTGCCCACAACACAAGCGGTGTCTGTGACTACAATGAAGCAAGAAATCATGTGTAATGGAAGGGAACAAAGTGAGAACAAGGTTTTGTGGGGTCTTCCATGGCAGTTTAATGGGGACATAAACACGGGAGGCGGCTTTGATTCAGGAAGAGCAAGTTGGAACAGTGGTCTCGGTTCATCTTGGCACGGTCTTCTCAATAGTCCACTAATGTAG 873 0.4582 MDPSRVQHQQMSNQSLENMIACSKAQQERKPRPQPEEALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSKRAQDQPLTPHNNPLGAIPSLSYDSNDLTLALVRLQKQSTGQLGFDDHDLSILGNPTSSHFDILGNTANPGFLDAFRSGFVETHQQNNNLQNLYCGYGNGDLGEVDNGSTEMMLPYDQEINNNVPTTQAVSVTTMKQEIMCNGREQSENKVLWGLPWQFNGDINTGGGFDSGRASWNSGLGSSWHGLLNSPLM 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0132 290 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Mibi01g0132 290 MobiDBLite consensus disorder prediction 1 39 - -
Mibi01g0132 290 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Mibi01g0132 290 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 200 IPR045174 GO:0003700|GO:0006355
Mibi01g0132 290 MobiDBLite consensus disorder prediction 1 22 - -
Mibi01g0132 290 MobiDBLite consensus disorder prediction 83 113 - -
Mibi01g0132 290 MobiDBLite consensus disorder prediction 98 113 - -
Mibi01g0132 290 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0132 Mibi-ChrMibi01 1399475 1400998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0132 1 290 C2C2-Dof Transcription Factor Family AT2G28510 40.683 3.89e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi01g0132 zf-Dof 4.6e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0132 01 1399475 1400998 Mibi07g0248 07 3191383 3193005 CCT
Mibi01g0132 01 1399475 1400998 Mibi01g0132 01 1399475 1400998 ECH