Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0126 ATGTTCGATCTTAATCTGAATGCCGATTCGACTGATACCTCTCATAACGATGAATCCATCAGGTTCTCGGACGAGCAAACGGAGGCGTCCGGGAACCAAATGGCGAAATCGGGGACTTCCAATTCCTCGAATGTCTACGCCGACGGTTCCAGCAATGGAGGAGACGATGACTCCTGCTCTACACGCGGCGGCGGAGATGGCTTAACCTTCAATTTCGATATCCTGAAGGAGGAACGAGTGAAAGAAGCCGCAAACAAGGAATTGTTTCTGTTCAGTGATGAAACCAAAGGAGTGGAAGGCGATTCGGGGAATTGGCAGGGTCAGTCTTTGTCTGGCCTTCCTTCGAGAAAGAGCTGGATGAGTCTTTCGTTTGATCATGGGGTTGGTAACGGAGACATGAAGATGGTACAGGTTCAGCAACCACCTCAACAACAGCAAGTGAAGAAAAGCAGAAGGGGTCCAAGGTCGAGGAGCTCGCAGTTCAGAGGGGTCACCTTTTACAGGAGGACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGGTTTGATACCGCTCATGCCGCTGCCAGAGCCTACGACCGTGCTGCTATCAAGTTTAGGGGACTTGATGCTGACATCAATTTCAATCTCAATGATTACGAGGAGGATCTTAAGCAGTTGAAAAATCTCACCAAAGAGGAGTTTGTGCACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGTTCTAAATACCGAGGAGTAACGCTGCACAAGTGTGGTCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGATAAGGCGGCTATCAAATGCAACGGAAGGGAGGCAGTGACCAACTTTGAATTAAGGACATACGAAGGAGAGATGAAGCCTGAGGTCATTACTGAAGGTGACAGTCGCAATCTTGACCTCAACTTGGGCATAGCAACACCAGGCAGTGGCCGAGAAGAAAATAGGGGCTATCAGTTACAACCGATCCCTTACAACATGCATACAGCAAGAAGTTCAAGGAAGGAGATCAATATTGATTCAGTAAATGGTGATCCATCCTCGAAAAGGCCAGTTATTGTGGAGGAGCGTCCTTCAGTATGGAATGGCATCTATCCCAGTTTCTTTCCCAGTGAGGAAAGGGCTGAGAGAATCAGTAGAGATCATTTACAAGGACTACCTCAATTGGGTTGGCAAACGCAAGGCCAGGTTACTGCCACGCCACTACCCCCGTTCTATGCTGCAGCATCATCAGGATTCTCAATTTCAGCTACTTTCCCATTGGCTACCATCTTTCCAACAAAAGCTTTGAGTTTGAGCTCATTTCCCCATGATATCCGTTTGGATCCATCTAGTGCATCTGGCAGCAACACAACTCCACATTGCCGGATGAAATCTCCGCAAGCGCCCCCCTAA 1488 0.4819 MFDLNLNADSTDTSHNDESIRFSDEQTEASGNQMAKSGTSNSSNVYADGSSNGGDDDSCSTRGGGDGLTFNFDILKEERVKEAANKELFLFSDETKGVEGDSGNWQGQSLSGLPSRKSWMSLSFDHGVGNGDMKMVQVQQPPQQQQVKKSRRGPRSRSSQFRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLNDYEEDLKQLKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFELRTYEGEMKPEVITEGDSRNLDLNLGIATPGSGREENRGYQLQPIPYNMHTARSSRKEINIDSVNGDPSSKRPVIVEERPSVWNGIYPSFFPSEERAERISRDHLQGLPQLGWQTQGQVTATPLPPFYAAASSGFSISATFPLATIFPTKALSLSSFPHDIRLDPSSASGSNTTPHCRMKSPQAPP 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0126 495 MobiDBLite consensus disorder prediction 138 160 - -
Mibi01g0126 495 MobiDBLite consensus disorder prediction 1 62 - -
Mibi01g0126 495 Pfam AP2 domain 251 301 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 Pfam AP2 domain 160 208 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 CDD AP2 251 309 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 126 352 - -
Mibi01g0126 495 MobiDBLite consensus disorder prediction 474 488 - -
Mibi01g0126 495 ProSiteProfiles AP2/ERF domain profile. 252 309 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 MobiDBLite consensus disorder prediction 474 495 - -
Mibi01g0126 495 FunFam AP2-like ethylene-responsive transcription factor 251 311 - -
Mibi01g0126 495 SMART rav1_2 252 315 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 SMART rav1_2 160 222 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 SUPERFAMILY DNA-binding domain 159 217 IPR016177 GO:0003677
Mibi01g0126 495 Gene3D AP2/ERF domain 251 311 IPR036955 GO:0003700|GO:0006355
Mibi01g0126 495 Gene3D AP2/ERF domain 159 218 IPR036955 GO:0003700|GO:0006355
Mibi01g0126 495 SUPERFAMILY DNA-binding domain 251 310 IPR016177 GO:0003677
Mibi01g0126 495 PRINTS Ethylene responsive element binding protein signature 253 264 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 PRINTS Ethylene responsive element binding protein signature 291 311 IPR001471 GO:0003700|GO:0006355
Mibi01g0126 495 MobiDBLite consensus disorder prediction 25 58 - -
Mibi01g0126 495 FunFam AP2-like ethylene-responsive transcription factor 159 218 - -
Mibi01g0126 495 ProSiteProfiles AP2/ERF domain profile. 160 216 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0126 Mibi-ChrMibi01 1328790 1332278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0126 107 335 AP2-EREBP Transcription Factor Family AT4G36920 70.886 3.14e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi01g0126 AP2 2.9e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0126 01 1328790 1332278 Mibi07g0239 07 3076158 3080231 CCT
Mibi01g0126 01 1328790 1332278 Mibi01g0126 01 1328790 1332278 ECH