Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0122 ATGCGCGTAGATGGGCCCTACTTACGGCGTCATCGAGTGGGCCACAGTGAATTGTTCCAGACGTTGACCCTTTTTCATTGGGAAGGAGATCGGACGGTCCAAAAGAGCGCGTTCAAGTGCCTCTCTCTTTCTCTCTTTCTCCCCCCTTCCTGCTCTTGCCTTCTCAGTCTTCGAGACACTCGCTCGCCTGTGTTTTCATGCTCTGGTCTCTGTTGTAGCCTCCGTGGTGTAGCTAAGACTCCGAGAGGGATTATGGGTTGCTTTTGTTTTTCAAAGAAATCAAGCAGAGAATCGCAGGCCAACGACTATAGCCAGAGCTCAAAGCCCAGCAATCATACAGATACGGTGAAAGTTGATTTAAATGCGAAGGGGAATAAGGAAGTTCAATCTAAGGATGACCAACTTTCTCTGGACGTGAAGAGATTGAATTTAACGGACAATGGAGACACTTCTGGTAGCTCGGCGCAGACTTTTACTTTCGATGAACTTGCAGCAGCGACAGGAAATTTCAGGTCTGATTGCTTTTTGGGAGAAGGGGGGTTTGGCAAGGTTTACAAGGGGCATTTGGAGAGAATAGACCAGGTTGTGGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGAGTTCGGGAATTTGTTGTTGAAGTTTTGACACTTAGTCTAGCAGACCACCCCAACCTTGTGAAATTAATTGGGTTTTGTGCTGATGGAGATCAAAGACTATTGGTCTATGAGTACATGCCTTTAGGATCTTTGGAGAACCACTTGCATGATCTTCCACCCAGTAGAAAACCACTTGATTGGAATACGAGAATGAAAATAGCTGCTGGAGCTGCAAAGGGATTGGAGTATTTACATGAGAAAATGAAGCCCCCTGTCATATACCGTGATTTGAAATGCTCAAACATTTTATTAGGTGAGGGATATCATCCCAAGTTATCTGATTTTGGCTTGGCAAAAGTGGGCCCAAGTGGCGATAAGACACACGTTTCAACAAGGGTTATGGGCACATATGGTTACTGCGCTCCAGATTATGCAATGACGGGCCAGCTGACATTCAAGTCAGACATCTACAGCTTTGGAGTTGTGCTTTTGGAGCTCATCACTGGCAGAAAAGCCATTGATAATACAAGACCTGCTAAAGAACAAAATCTAGTTGCATGGGCAAGACCGTTGTTCAAAGATAGGAGGAAATTCTCCCAGATGGTGGACCCATTGCTTGAAGGCCAGTATCCTGTGAGAGGTTTGTACCAAGCTCTAGCTATTGCTGCAATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTGATAACCGACGTGGTTACCGCATTAAACTACCTTGCCTCCCAGAGATATGATCCCCTAATTCATCATGTACAAAACTCCAGAAGAAGGGACGATGATCAAAGACATCATGTTCGTAATGGTTCTTCCTCAGACAAATCTACAGACTAA 1455 0.4529 MRVDGPYLRRHRVGHSELFQTLTLFHWEGDRTVQKSAFKCLSLSLFLPPSCSCLLSLRDTRSPVFSCSGLCCSLRGVAKTPRGIMGCFCFSKKSSRESQANDYSQSSKPSNHTDTVKVDLNAKGNKEVQSKDDQLSLDVKRLNLTDNGDTSGSSAQTFTFDELAAATGNFRSDCFLGEGGFGKVYKGHLERIDQVVAIKQLDPNGLQGVREFVVEVLTLSLADHPNLVKLIGFCADGDQRLLVYEYMPLGSLENHLHDLPPSRKPLDWNTRMKIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTRPAKEQNLVAWARPLFKDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVITDVVTALNYLASQRYDPLIHHVQNSRRRDDDQRHHVRNGSSSDKSTD 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0122 484 PANTHER OS07G0668900 PROTEIN 89 454 - -
Mibi01g0122 484 SMART serkin_6 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0122 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Mibi01g0122 484 MobiDBLite consensus disorder prediction 461 478 - -
Mibi01g0122 484 MobiDBLite consensus disorder prediction 461 484 - -
Mibi01g0122 484 Coils Coil 479 484 - -
Mibi01g0122 484 Gene3D Transferase(Phosphotransferase) domain 1 247 470 - -
Mibi01g0122 484 CDD STKc_IRAK 176 445 - -
Mibi01g0122 484 FunFam Serine/threonine-protein kinase PBS1 247 462 - -
Mibi01g0122 484 ProSiteProfiles Protein kinase domain profile. 170 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0122 484 Gene3D Phosphorylase Kinase; domain 1 141 246 - -
Mibi01g0122 484 ProSitePatterns Protein kinases ATP-binding region signature. 176 199 IPR017441 GO:0005524
Mibi01g0122 484 FunFam probable serine/threonine-protein kinase RLCKVII 143 246 - -
Mibi01g0122 484 SUPERFAMILY Protein kinase-like (PK-like) 156 462 IPR011009 -
Mibi01g0122 484 Pfam Protein kinase domain 175 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0122 Mibi-ChrMibi01 1287130 1290882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0122 85 449 Glycoside Hydrolase AT3G07070 58.108 7.64e-150 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mibi01g0122 Pkinase 2.1e-43 CL0016