Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0120 ATGGAGCAATCAGAGAAGGCAGGAAAGCAATCATCAAGAAGGTCATCATTTCCAAGAGACCCTCGTGGTTCACTGGAAGTGTTCAACCCTTCGTCCTACTCAACTGAAAGTCCATCAGATTCGCCATTAAGATCTCAGCCAAAGTGGAAAACTTGGATCGAGCCATCACCGACCACCACTAAGGATGAAATCACCAGCACATCATGGATGGCTCTCAAGGATTCCGACAGTCCGCCGCCGCAGACCCTCTCGGCCATTCTCAACGAGAGACCTGAGCTGACAGCCGGAGATTTGGGGACGGCGGCGCAGAGGGCGGCAGAGTGGGGATTGGTGCTGAAGACTGATACGGAGACGGGGAAGCCGCAAGGAGTGGCTGTGAGGAATTCGGGAGGAGAGGAACCAAATGGGAAGATGGTGGCTACTTCTAGAAGGAACTCAAACAACTCTGTGAGAAGCTCCGGCGAGTCGTCGGATGACGGGGGAAAAGAAATACGAGGATTTCCCAGAATTTCAGAGGATTTGAAGGATGCTTTGTCCGTTTTCCAACAGACTTTCGTCGTCGCCGATGCTACCAAACCTGACTTTCCGATCATGTACGCCAGCGCCGGCTTCTTCAAGATGACGGGTTATACTTCCAAGGAGGTCATTGGGAGGAACTGTCGGTTTTTACAGGGAGCGGATACGGATCCAGAAGACGTGGCAAAGATAAGGGAGGCTTTGCAAGCAGGGACGAGTTACTGTGGAAGATTACTGAATTACAAGAAAGACGGCACTCCTTTCTGGAATCTCCTCACTATTTCCCCCATTAAGGACGACGATGGAAAAGTCCTCAAATTTATTGGAATGCAAGTGGAGGTTAGCAAGCATACGGAGGGATCCAAGGAGAAAACGCTACGTCCCAATGGATTGCCCGAATCTCTGATTCGATATGATGCTCGTCAAAAAGAGAAGGCTTCCACCACCGTGACTGAGTTAGTGAAGGCAGTGAAGCGGCCCCGAGCACTCAGTGAGTCAGGAAAGCGTCCATTGATCAGAAAATCTGGAGGTGATGAAGAACACAAAGTAGAAAGTTTGCCAAGGAGGAAATCAGAGAGCGTTGCCTCACTAAGGCCAAAACAACATGGCGGCAATCGAAATTCAATGCAAAAAATCAATGAGCTTCCTGACAAGAAACAGAAAAGTCGTCGTCGTTCCTTCATGGGCTTCATTAAGAAAAGTCAGCCCACTGAAGAAAGCTATGAGGACAATGAAGTTGTGGAGGGTAGCTCAGAGAGTGAGGAAGAGGAAGAGAGGCCTGATAGTATTGATGACAACAAACTAGCGCAAAGAGAGAAGCGAAAGGGTCTTGATCTTGCAACAACACTTGAACGTATTGAGAAGAACTTTGTCATTACAGATCCAAGACTTCCTGACAATCCCATCATCTTTGCATCTGATAGTTTTCTAGAACTTACGGAGTACAGTCGGGAAGAAATTTTGGGAAGAAACTGCAGGTTTTTGCAAGGACCTGAAACTGATCCAGCAACTGTGAGGAAAATTAGAGAGGCGATTGACAGCCAAAAAGAAGTTACGGTGCAACTGATTAATTATACAAAGACTGGCAAAAAGTTCTGGAACCTATTTCATCTGCAACCTATGCGTGATCAGAAGGGAGAAGTACAGTATTTTATTGGTGTTCAGCTTGATGGTAGCCAGCATGTGGAACCTCTTCATAACTGTATTGCAGAAGACACGACAAAGGAGGGAGAAAAATTGGTTAAAACAACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCAGATGCTAATTTGAAACCAGATGATTTATGGTTAAATCACTCCAAAGTGGTTCTTCCCAAACCTCATAGGAAGGATAACCCTGCTTGGGGAGCTATCCTGAAGATCCTAGAAAGTGGAGAACAGATAGGCTTGAAGCATTTTAAGCCCATCAAACCTTTGGGATCTGGGGACACTGGCAGTGTGCATTTGGTTGAGCTGTGTGGAACAGGGCAATATTTTGCCATGAAGGCTATGGATAAGAGTGTTATGCTAAATCGCAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTTGACATGTTGGACCATCCTTTTCTTCCAGCATTATATGCTTCTTTTCAGACCAAAACGCACATTTGCCTGATAACTGATTATTGTCCCGGCGGAGAACTGTTCCTGCTTCTAGACCGGCAGCCGACAAAAGTTATCAAAGAAGATGCAGCAAGGTTTTACGCCGCTGAGGTTGTGGTTGCGCTGGAGTACCTACATTGTCAAGGAATAATATATCGGGATTTGAAGCCAGAAAATGTGTTACTCCAGAGAAATGGGCATGTGTCCCTGACAGATTTTGACTTGTCATGTTTAACATCCAGCAAACCACAGCTTTTAATTCCACCTTCAAATGAAAAGAAGAAACAGAAAGGACAGCAGACTCCAATATTTGTGGCCGAACCAATGAGAGCGTCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATAACTGCTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGTATTCTTCTATATGAAATGTTGTATGGATATACTCCATTCAGGGGGAAGACAAGGCAAAAAACATTTGCCAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCATGCAAAGCAGTTAATACACCGGTTGTTACACAGAGATCCCAAAAACCGATTGGGCTCACAGGAAGGAGCAAACGAAATAAAGCGTCACCCTTTCTTCAAAGGGGTCAATTGGGCCCTCGTTCGCAGCATGAACCCTCCTGACCTGGACGCTCCTCTCTTTGGTGCAACTGAGGATGAGAAGGAAGTCAGAATTGTTGATCCTGCGCTGGAGGAACTACAAACTGATTATTTCTGA 2940 0.4578 MEQSEKAGKQSSRRSSFPRDPRGSLEVFNPSSYSTESPSDSPLRSQPKWKTWIEPSPTTTKDEITSTSWMALKDSDSPPPQTLSAILNERPELTAGDLGTAAQRAAEWGLVLKTDTETGKPQGVAVRNSGGEEPNGKMVATSRRNSNNSVRSSGESSDDGGKEIRGFPRISEDLKDALSVFQQTFVVADATKPDFPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGKVLKFIGMQVEVSKHTEGSKEKTLRPNGLPESLIRYDARQKEKASTTVTELVKAVKRPRALSESGKRPLIRKSGGDEEHKVESLPRRKSESVASLRPKQHGGNRNSMQKINELPDKKQKSRRRSFMGFIKKSQPTEESYEDNEVVEGSSESEEEEERPDSIDDNKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDSQKEVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAEDTTKEGEKLVKTTAENVDEAVRELPDANLKPDDLWLNHSKVVLPKPHRKDNPAWGAILKILESGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTGQYFAMKAMDKSVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVIKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQRNGHVSLTDFDLSCLTSSKPQLLIPPSNEKKKQKGQQTPIFVAEPMRASNSFVGTEEYIAPEIITASGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHAKQLIHRLLHRDPKNRLGSQEGANEIKRHPFFKGVNWALVRSMNPPDLDAPLFGATEDEKEVRIVDPALEELQTDYF 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0120 979 MobiDBLite consensus disorder prediction 413 433 - -
Mibi01g0120 979 MobiDBLite consensus disorder prediction 139 155 - -
Mibi01g0120 979 FunFam Putative LOV domain-containing protein 184 340 - -
Mibi01g0120 979 MobiDBLite consensus disorder prediction 1 20 - -
Mibi01g0120 979 MobiDBLite consensus disorder prediction 329 442 - -
Mibi01g0120 979 ProSiteProfiles PAC domain profile. 244 298 IPR000700 -
Mibi01g0120 979 Gene3D PAS domain 436 600 - -
Mibi01g0120 979 Gene3D Transferase(Phosphotransferase) domain 1 732 947 - -
Mibi01g0120 979 FunFam LOV domain-containing protein 647 731 - -
Mibi01g0120 979 Gene3D Phosphorylase Kinase; domain 1 647 731 - -
Mibi01g0120 979 CDD PAS 462 562 IPR000014 -
Mibi01g0120 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Mibi01g0120 979 FunFam Putative LOV domain-containing protein 732 946 - -
Mibi01g0120 979 MobiDBLite consensus disorder prediction 330 368 - -
Mibi01g0120 979 Coils Coil 971 979 - -
Mibi01g0120 979 ProSiteProfiles Protein kinase domain profile. 648 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0120 979 MobiDBLite consensus disorder prediction 27 84 - -
Mibi01g0120 979 Pfam PAS domain 191 287 IPR000014 -
Mibi01g0120 979 Pfam PAS domain 470 562 IPR000014 -
Mibi01g0120 979 PANTHER FLIPPASE KINASE 1-RELATED 305 951 - -
Mibi01g0120 979 Pfam Protein kinase domain 650 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0120 979 CDD PAS 193 286 IPR000014 -
Mibi01g0120 979 CDD STKc_phototropin_like 646 953 - -
Mibi01g0120 979 FunFam LOV domain-containing protein 436 600 - -
Mibi01g0120 979 MobiDBLite consensus disorder prediction 1 84 - -
Mibi01g0120 979 MobiDBLite consensus disorder prediction 114 166 - -
Mibi01g0120 979 SUPERFAMILY Protein kinase-like (PK-like) 633 955 IPR011009 -
Mibi01g0120 979 SMART pac_2 247 289 IPR001610 -
Mibi01g0120 979 SMART pac_2 524 566 IPR001610 -
Mibi01g0120 979 TIGRFAM sensory_box: PAS domain S-box protein 194 290 IPR000014 -
Mibi01g0120 979 TIGRFAM sensory_box: PAS domain S-box protein 472 562 IPR000014 -
Mibi01g0120 979 Gene3D PAS domain 184 338 - -
Mibi01g0120 979 ProSiteProfiles PAS repeat profile. 170 241 IPR000014 -
Mibi01g0120 979 ProSiteProfiles PAC domain profile. 521 575 IPR000700 -
Mibi01g0120 979 SUPERFAMILY PYP-like sensor domain (PAS domain) 463 562 IPR035965 -
Mibi01g0120 979 ProSitePatterns Protein kinases ATP-binding region signature. 654 677 IPR017441 GO:0005524
Mibi01g0120 979 SMART pas_2 449 518 IPR000014 -
Mibi01g0120 979 SMART pas_2 172 241 IPR000014 -
Mibi01g0120 979 ProSiteProfiles PAS repeat profile. 447 520 IPR000014 -
Mibi01g0120 979 SMART serkin_6 648 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0120 979 SUPERFAMILY PYP-like sensor domain (PAS domain) 191 283 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0120 Mibi-ChrMibi01 1271503 1279806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0120 1 979 AGC Kinase Gene Family AT3G45780 70.920 0.0 1374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi01g0120 Pkinase 3.8e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0120 01 1271503 1279806 Mibi01g0120 01 1271503 1279806 ECH