Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0119 ATGTATATTCATCAGAGTACTGTTGAGACATCGTTGTCATGGGATATGAAACTAATGAGAGAGAGATATGTGAATGTGAGGGGAGAAAGTGGTGGTGGTGGGGGGCCGAGTTCGGAATGTGGAGGGAGAAGAAAGCAAATTGGGTACGATTTGTTAACGGACCTACGCTCCATGAATCATCACACCGTGGCCGGAATCTCATGCGCCGCCGACATCCTCGGGAACAAGCCGTCGCCGGAGGTGAGCCACAGCAGTTGCAGCAGCGGCCATGACTCGCCGGCTATTTACCAGAGGAGTGGGGCCCACCACCTGGAGTTCCCCGTCAGAAAAGTTTACAGTGCTGGTGATTTGCAGGGGATGGATGTGAATGTGATGCATAACTATAATGGGGGATCAGAAAGGGGAATGTGGAGCGAAAGTAGTATGATAATTGAAGGAATGAGGAGAGCGCATCCTTACAGCCCGGAGGAGAAGAAGATGAGGATCGAGAGATACAGATTCAAGAGACACAAGAGGAACTTCAACAAGACTATTCAGTATGTATGCAGGAAGACATTGGCGGACAGCAGGCCACGCATCAGAGGAAGATTTGCAAAGAGTGAAGATAGTGAGATCAAGAGTGAGAAAAGAGATGACATCAATTGGGACACTTTTTTTGAAACCTTGGTGGTCGCTAACCTTGTTCACCAGCCATGA 696 0.4885 MYIHQSTVETSLSWDMKLMRERYVNVRGESGGGGGPSSECGGRRKQIGYDLLTDLRSMNHHTVAGISCAADILGNKPSPEVSHSSCSSGHDSPAIYQRSGAHHLEFPVRKVYSAGDLQGMDVNVMHNYNGGSERGMWSESSMIIEGMRRAHPYSPEEKKMRIERYRFKRHKRNFNKTIQYVCRKTLADSRPRIRGRFAKSEDSEIKSEKRDDINWDTFFETLVVANLVHQP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0119 231 ProSiteProfiles CCT domain profile. 158 200 IPR010402 GO:0005515
Mibi01g0119 231 Pfam CCT motif 160 200 IPR010402 GO:0005515
Mibi01g0119 231 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 81 203 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0119 Mibi-ChrMibi01 1265678 1269671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0119 146 203 C2C2-CO-like Transcription Factor Family AT5G24930 51.724 1.63e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi01g0119 CCT 1.6e-16 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0119 01 1265678 1269671 Mibi01g0119 01 1265678 1269671 ECH