Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0112 ATGACGGCAGACACCTCTGTCCCTGACAAGCAAAATGGGCCGGTACTAGGCATATATGACTGCCCCGATAGCCCAAGCGATGGATTAAATGCAAGAAAAGAACTTCCAAGTCACCCTAATATTACTTCTGTTTACAAGTCTAATAATTTGATGGCTGAGTTTGTTGATCTCAAGCCTCCAGAATTTAGGTGCAAGACAGGTCAATATGTTGTGCTTGTAGATAAGCGAGGAGAGGAAATTGGTAAAGGGAAAGTGTTTCAGCTTAAAGCTGATAAAGGTTTGCGGTTGCCCTACCCATCGGAAGCTGCTGGCTCCTTATTTAAAGATAGTGAAACCAAGTTAGGTGTCATGAGAGTGTTATGGGATGCAAACAGAATTTTTGTGCTGAGGTCCATTTTTATCCTGGAAGCGGGTCGGATCGGGTCGAGATCCAATATTCTGGCTATCTCGCAGGGCGGATATATAAGGCGCTCTTTCGTCCTCACCGAAAACCCTAGAATCGGCCACTACCTCTGCTCCCCCAACGCAGGGTTTCAGGAAGATTTGACAGGCGAATTTCTCTTTCGGTTATCCATGGCGCCGCCTAAAGGTGATGGTTCAAAGAAGACTGACCCAAAGTCACAGGCCTTGAGAACTGCCAAGGCAGTAAAATCGGGCCCCACTTTCAAGAAGAAGGCCAAGAAAATTAGAACATCAGTTACATTCCATCGACCCAAGACATTGAAAAAGGATAGAAATCCAAAGTACCCTCGTATCAGTGCTCCACCAAGAAATAAGCTTGATCATTATCAAATTCTCAAGTATCCTCTCACCACCGAGTCAGCGATGAAAAAGATTGAAGACAACAACACTTTAGTTTTCATTGTTGACTTGCGTGCAAACAAAAAGAAGATAAAGGATGCAGTGAAGAAAATGTATGACATTCAGGCCAAGAAAGTGAACACTTTGATCAGGCCCGACGGTACCAAGAAGGCCTATGTCAGGTTGACTCCTGATTATGATGCCTTGGATGTCGCAAACAAGATTGGAATCATCTAA 1038 0.4422 MTADTSVPDKQNGPVLGIYDCPDSPSDGLNARKELPSHPNITSVYKSNNLMAEFVDLKPPEFRCKTGQYVVLVDKRGEEIGKGKVFQLKADKGLRLPYPSEAAGSLFKDSETKLGVMRVLWDANRIFVLRSIFILEAGRIGSRSNILAISQGGYIRRSFVLTENPRIGHYLCSPNAGFQEDLTGEFLFRLSMAPPKGDGSKKTDPKSQALRTAKAVKSGPTFKKKAKKIRTSVTFHRPKTLKKDRNPKYPRISAPPRNKLDHYQILKYPLTTESAMKKIEDNNTLVFIVDLRANKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0112 345 Pfam Ribosomal protein L23, N-terminal domain 206 255 IPR005633 -
Mibi01g0112 345 ProSitePatterns Ribosomal protein L23 signature. 323 338 IPR001014 GO:0019843
Mibi01g0112 345 Gene3D - 226 345 IPR012677 -
Mibi01g0112 345 FunFam 60S ribosomal protein L23a 225 345 - -
Mibi01g0112 345 Pfam Ribosomal protein L23 265 326 IPR013025 GO:0003735|GO:0005840|GO:0006412
Mibi01g0112 345 PANTHER 60S RIBOSOMAL PROTEIN L23A 198 345 IPR013025 GO:0003735|GO:0005840|GO:0006412
Mibi01g0112 345 TIGRFAM uL23_arch: ribosomal protein uL23 269 345 IPR019985 GO:0003735|GO:0005840|GO:0006412
Mibi01g0112 345 MobiDBLite consensus disorder prediction 1 21 - -
Mibi01g0112 345 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 262 338 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mibi01g0112 345 Hamap 50S ribosomal protein L23 [rplW]. 265 345 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0112 Mibi-ChrMibi01 1194071 1198416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0112 192 345 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 85.065 1.05e-64 200