Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0111 ATGGTTTCAAATTCCACGAAGCATGATGTACCTTTGGAATGGAATGCACGACAGACTATGCAATCTGAAAACCAAGCTCAAAGGCGACTTCTAAATGAGTCGACTAAGGGCGATCCATCTCAACGGTTTCGTAGCCATGGTTTGGAATTGTCTGCAATACTTTCTCTTCGCATGTCCATGTTTAAGAAAAGTGAGGTGAAAGAGAAGCCAAACATGGCAGACTGTGAGATATGCTTAGGTGAGTTTGAAGAAGGGGAATGGCTCAAACATCTTCCATACTGCTCCCATGTCTTCCATGTTTCCTGCATTGATTCGTGGCTTCAGTGTCGCTCAAATTGCCCTATTTGCAAATCTCAAGTCTATCTTGACCTCAGTTCTGATATAGAATGTTCCATATCTTCCCATGCTTTGCTACAACCTTTGAGGGGGGAAAATATTTCTCCAGAATCTCCTGGCTCTGAGGCTGCACATGGTCGGGCGATAAGATAG 489 0.4397 MVSNSTKHDVPLEWNARQTMQSENQAQRRLLNESTKGDPSQRFRSHGLELSAILSLRMSMFKKSEVKEKPNMADCEICLGEFEEGEWLKHLPYCSHVFHVSCIDSWLQCRSNCPICKSQVYLDLSSDIECSISSHALLQPLRGENISPESPGSEAAHGRAIR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0111 162 Pfam Ring finger domain 74 117 IPR001841 -
Mibi01g0111 162 MobiDBLite consensus disorder prediction 143 162 - -
Mibi01g0111 162 ProSiteProfiles Zinc finger RING-type profile. 75 117 IPR001841 -
Mibi01g0111 162 SMART ring_2 75 116 IPR001841 -
Mibi01g0111 162 PANTHER RING-H2 FINGER PROTEIN ATL16 14 128 IPR044600 GO:0016567|GO:0016740
Mibi01g0111 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 122 IPR013083 -
Mibi01g0111 162 CDD mRING-H2-C3H2C2D_ZSWM2 75 117 - -
Mibi01g0111 162 SUPERFAMILY RING/U-box 74 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0111 Mibi-ChrMibi01 1191824 1192385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0111 19 122 C3H Transcription Factor Family AT1G72220 36.364 2.14e-18 79.0