Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0108 ATGTCGGGGCCAGTCTTCATGGAAGATAGCTCAGGAAAACAAAGGAACATGGTTCAACAAGAATTTCGGAAAGGTCCATGGACAGAACAAGAGGACATCAAATTGGTCTCCTTTGTTGGCTTATTCGGAGACCGGAGATGGGATTTTATAGCCAAAGTATCAGGTTTGAAGGTGGAGGGAGACAGTAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACTTGCATCCCGGTCTCAAACGGGGCAAGATGACGCCCCAAGAAGAACGCCTCGTGCTGGAGCTTCACGCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAATTGCCAGGGCGCACAGATAATGAGATTAAGAATTACTGGAGGACTTACATGAGGAAGAAAGCCCAGGAGACAAAGAGGGCGGCCACTCCATCAATATCTAGCTGTCATTCTTCAATATCATCAACTAATCAAGCAGTGGATTCACATCCTTCCATTGAGAGTGGAGAAGAAAGGTTTCATGATACTGGAGGGCCTAACATGACTGTCTCGACTGATATCAAGATAGGGAAAGAACAAGGTGAACAGGGTTACACCATGGATGACATATGGAAAGATATTACTCTGTCAGAAGAGAATGTTCAGAATCCAGTCCATTCTAGTGCTAGGCATATGGAAGAGGAGCGCAACTTCTTTTGTCCTCGTCTGCTATCTCCTTCTTGGGAGTATTCTTCAGACTCTTTATGGGTTATGGATGAAGAAGAAAGTAAGACGTTTCTCCCTTCAAGTGATCCATGCTTTTCCAGTTTTGAACAAGGGGCAGCATTTCTAACTGGCTAA 831 0.4465 MSGPVFMEDSSGKQRNMVQQEFRKGPWTEQEDIKLVSFVGLFGDRRWDFIAKVSGLKVEGDSNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKKAQETKRAATPSISSCHSSISSTNQAVDSHPSIESGEERFHDTGGPNMTVSTDIKIGKEQGEQGYTMDDIWKDITLSEENVQNPVHSSARHMEEERNFFCPRLLSPSWEYSSDSLWVMDEEESKTFLPSSDPCFSSFEQGAAFLTG 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0108 276 FunFam MYB transcription factor 85 153 - -
Mibi01g0108 276 MobiDBLite consensus disorder prediction 137 161 - -
Mibi01g0108 276 Gene3D - 24 82 - -
Mibi01g0108 276 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Mibi01g0108 276 MobiDBLite consensus disorder prediction 136 177 - -
Mibi01g0108 276 SUPERFAMILY Homeodomain-like 22 124 IPR009057 -
Mibi01g0108 276 Gene3D - 86 131 - -
Mibi01g0108 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 77 IPR017930 -
Mibi01g0108 276 SMART sant 82 130 IPR001005 -
Mibi01g0108 276 SMART sant 23 79 IPR001005 -
Mibi01g0108 276 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 132 IPR017930 -
Mibi01g0108 276 CDD SANT 26 77 IPR001005 -
Mibi01g0108 276 ProSiteProfiles Myb-like domain profile. 19 77 IPR001005 -
Mibi01g0108 276 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 159 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi01g0108 276 CDD SANT 85 128 IPR001005 -
Mibi01g0108 276 Pfam Myb-like DNA-binding domain 24 77 IPR001005 -
Mibi01g0108 276 Pfam Myb-like DNA-binding domain 83 127 IPR001005 -
Mibi01g0108 276 FunFam Myb transcription factor 24 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0108 Mibi-ChrMibi01 1165929 1167385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0108 17 274 MYB Transcription Factor Family AT5G59780 57.752 1.25e-90 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi01g0108 Myb_DNA-binding 4.4e-13 CL0123