Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0106 ATGAAGTGGCACGCTGCTGGCTTCTTTTACCAACAATTTCTCACTTGCTTTTTCTTCCTCGTCTCATCTTCCTTCACTGCTGACTTCTTTGCTCAGCTTCCCCAGTCCCCACTATCGTCCTCCTATGAGTTTCTATATGCCCCCACGCGCTCTGCTCCCCGTCCAATAAGAAATCCACAGTTAACCAGCTTGGTTGAAGTTGAAGCTCAGCTTTATGAGCTTCATTCCCATCTCCACCTCATAAACGCAGCCATGAAGAGAGCAAGAGATGAAGGTGGGCTGGAGGGCTTAAATATGGCCAAGTGTTTGATATTACTGTCCAGAGTTGGGGTCACTAACCCAACTTCTTCGCATGCTAGTAGTAGTGATGGTGGTTTTAAGTGCAAGACTTGTAACAGAGTGTTCCCTTCTTTTCAAGCCCTTGGAGGGCACCGAGCCAGCCACAAGAGGCCCAAGCTCTTGCTTTCCTCATCGCATCTACCTTTGAAGCTCAACAAGACGCACCCTTGCCCCATTTGTGGAATCCAGTTTGGGATTGGGCAAGCCCTCGGAGGTCACATGAGAAAGCATAGAACTCCTGTTCATGTCCATAAGCACAAGTTGGATTTATGCTTCGACTTGAACTTGACTCCATTAGAAAATGATCATCTCAACCTCAACTTGACGACGCCCCTCGTCGATTTTTTCTCTTGA 693 0.4762 MKWHAAGFFYQQFLTCFFFLVSSSFTADFFAQLPQSPLSSSYEFLYAPTRSAPRPIRNPQLTSLVEVEAQLYELHSHLHLINAAMKRARDEGGLEGLNMAKCLILLSRVGVTNPTSSHASSSDGGFKCKTCNRVFPSFQALGGHRASHKRPKLLLSSSHLPLKLNKTHPCPICGIQFGIGQALGGHMRKHRTPVHVHKHKLDLCFDLNLTPLENDHLNLNLTTPLVDFFS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0106 230 SUPERFAMILY beta-beta-alpha zinc fingers 126 190 IPR036236 -
Mibi01g0106 230 Pfam C2H2-type zinc finger 126 151 - -
Mibi01g0106 230 Pfam C2H2-type zinc finger 168 192 - -
Mibi01g0106 230 Gene3D Classic Zinc Finger 124 190 - -
Mibi01g0106 230 SMART c2h2final6 168 190 IPR013087 -
Mibi01g0106 230 SMART c2h2final6 126 148 IPR013087 -
Mibi01g0106 230 ProSitePatterns Zinc finger C2H2 type domain signature. 128 148 IPR013087 -
Mibi01g0106 230 PANTHER ZINC FINGER PROTEIN ZAT5 92 216 - -
Mibi01g0106 230 ProSitePatterns Zinc finger C2H2 type domain signature. 170 190 IPR013087 -
Mibi01g0106 230 ProSiteProfiles Zinc finger C2H2 type domain profile. 126 153 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0106 Mibi-ChrMibi01 1147723 1149017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0106 85 215 C2H2 Transcription Factor Family AT2G37430 43.827 6.49e-34 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi01g0106 zf-C2H2_6 8.4e-08 CL0361