Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0098 ATGGGCTCAATCCGGCCGGGATCGATGGCGGACAGAGCCCGGCAGGCGAAAATACCGCCGCCGGAGGCAGCTCTGAAGTGTCCTCGCTGTGAATCCACCAACACAAAATTCTGTTACTTCAACAACTACAGCCTCTCTCAGCCAAGGCACTTCTGCAAGACCTGCCGCCGTTACTGGACCAGAGGCGGCGCCCTCCGTAACGTCCCCGTCGGCGGAGGATGCCGCCGCAACAAGAAGACCAAGAGATCATGCCGCTCCAACACCCCCATGGCCAACGAGCTGATTGGTCATCATCAGTTGCCATCACAGCAGGCATGTAATAATAATTTTCCATTCATGGCGTCGTTACACAATATGAGTCGCATGGGGCTCAACTTGCAAGGGCAGAGTCATGATCTTGATCATCATCCCATGTTCCCCATTGGGCTTAACGGAAGTAGTAATAATGTTTCCAACGGAGGAGGAGGAGGAGGAGGAGGACTTGACCAGTGGCGGTTAAAGCAGTTGCCTTTCTTCAACGGTTTTGATCAGTCAAACCCGTTTCAAAGCGAGGTGGCTAGTTCTAGGGTTAAAATGGAGGACAATGGAGCTCTCAACATGAGTAGGAGGACCTCGTCTCAAGCTCAAGCTCCGAATATGTCAGAAACTATCAACCAATACTATTCGTGGACTCCTGCCACCACAGACATTATATCTGGCCTTCCCTCTTCTTCCACCACCCATGTCCTCTAA 732 0.5205 MGSIRPGSMADRARQAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKTKRSCRSNTPMANELIGHHQLPSQQACNNNFPFMASLHNMSRMGLNLQGQSHDLDHHPMFPIGLNGSSNNVSNGGGGGGGGLDQWRLKQLPFFNGFDQSNPFQSEVASSRVKMEDNGALNMSRRTSSQAQAPNMSETINQYYSWTPATTDIISGLPSSSTTHVL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0098 243 Pfam Dof domain, zinc finger 24 79 IPR003851 GO:0003677|GO:0006355
Mibi01g0098 243 ProSitePatterns Zinc finger Dof-type signature. 27 63 IPR003851 GO:0003677|GO:0006355
Mibi01g0098 243 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 213 IPR045174 GO:0003700|GO:0006355
Mibi01g0098 243 ProSiteProfiles Zinc finger Dof-type profile. 25 79 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0098 Mibi-ChrMibi01 1027608 1028339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0098 4 81 C2C2-Dof Transcription Factor Family AT2G37590 88.462 8.21e-48 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mibi01g0098 zf-Dof 9.1e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0098 01 1027608 1028339 Mibi07g0164 07 2277692 2278888 CCT