Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0085 ATGAAGTGCTTCCATTTCTCAGATCCCCGAGAAGACGATGACTCCGTTACCTCCAAGGCCTCCAAGCTCTCCTGGGCTCGCTCACTCAGCGTCGCTTCTTCTACCTTGGGCTCAAGGAGGTCTGAATTTGATTCTGATTCTAAGGACTTCTCAGATGCAGCCGAGTTCCACAAATTCTTGTATCAGAGGCGAGCTAATGATTTGCGCGTGTTTTCCTTCTCCGAGCTTAAATTGGCAACTCGTGGGTTCAGTAGGGCCCTTTTGATCGGAGAGGGAGGGTTTGGTTGTGTCTACAAAGGGGTTGTCAGGGTACCCAACAATGACGCTTCTCTTTCCGATTTGGATGTTGCGATCAAACAATTGAACCGTAATGGACCTCAGGGTCACAAGGAATGGATCAATGAAGTGAACTTGTTGGGTGTAATCAAGCATCCAAATCTTGTGAAGTTAGTGGGATATTGCGCTGAAGATGATGAAAGGGGAATTCAGCGGCTTTTAGTCTATGAGCTTATGCAGAATAAAAGCTTGGAAGATCATCTTTTTGGTCGAGTGCCATCAACACTCACATGGATAGCAAGATTAAAAATTGCTCAAGATGCTGCCCGTGGATTGGCATACTTGCATGAAGAAATGGATTTTCAGCTTATTTTTCGGGATTTTAAGACGTCCAATGTCCTGCTGGATGAGGATTTTAATGCAAAGCTTTCTGATTTTGGACTTGCTAGGCAAGGACCCTCAGAAGGATTTGGCCATGTTTCAACTTCTGTTGTGGGAACTATTGGTTACGCTGCACCAGAGTATGTTCATACCGGTAAGTTAACCGCTAAGAGTGATGTTTGGAGCTTTGGTGTAGTTCTTTATGAACTCATTACTGGGAGGAGAGCTGTTGAGAGAAACCTACCGAGAAATGAACAGAAGCTTTTGGAATGGGCAAGACATTATGTTTCTGACTCTAGAAAGTTTCATCTTTTGGTAGACCCACGACTTGAAGGACAATATTGCATTAAATCAGCTCAAAAACTTGCAACATTGGCAAACAAGTGTCTTACAAAGCACCCAAAGTGCCGTCCTAAAATGAGTGAAGTGGTTGAGATACTTGGAAGCATAATTAGCGAGACAATTTCTGATTTTGAATGCTCTCTTCAAGATGTTGTCAGTGAAGAAGAAAAAGAAGAGAGGTTGTCTGCTGAAGAGGACACTGAATCTGGGACGGCTAAACAAGGGAATAATTATCTTAAGAAGGTATTGGACTTCAGAGAAATGATGAGTTTAAGAAACAAGTCCATTAGAAGGTTGGATTGGAAGAACTGGGCGCCTGGTTTGGTACGAACTTGGTGA 1338 0.4335 MKCFHFSDPREDDDSVTSKASKLSWARSLSVASSTLGSRRSEFDSDSKDFSDAAEFHKFLYQRRANDLRVFSFSELKLATRGFSRALLIGEGGFGCVYKGVVRVPNNDASLSDLDVAIKQLNRNGPQGHKEWINEVNLLGVIKHPNLVKLVGYCAEDDERGIQRLLVYELMQNKSLEDHLFGRVPSTLTWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNVLLDEDFNAKLSDFGLARQGPSEGFGHVSTSVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLEWARHYVSDSRKFHLLVDPRLEGQYCIKSAQKLATLANKCLTKHPKCRPKMSEVVEILGSIISETISDFECSLQDVVSEEEKEERLSAEEDTESGTAKQGNNYLKKVLDFREMMSLRNKSIRRLDWKNWAPGLVRTW 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0085 445 ProSitePatterns Protein kinases ATP-binding region signature. 89 119 IPR017441 GO:0005524
Mibi01g0085 445 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 171 379 - -
Mibi01g0085 445 ProSiteProfiles Protein kinase domain profile. 83 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0085 445 PANTHER OS01G0588500 PROTEIN-RELATED 43 368 - -
Mibi01g0085 445 Gene3D Transferase(Phosphotransferase) domain 1 171 395 - -
Mibi01g0085 445 SUPERFAMILY Protein kinase-like (PK-like) 65 366 IPR011009 -
Mibi01g0085 445 FunFam Serine/threonine-protein kinase BIK1 51 170 - -
Mibi01g0085 445 Pfam Protein tyrosine and serine/threonine kinase 89 366 IPR001245 GO:0004672|GO:0006468
Mibi01g0085 445 CDD STKc_IRAK 89 369 - -
Mibi01g0085 445 Gene3D Phosphorylase Kinase; domain 1 63 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0085 Mibi-ChrMibi01 949299 951767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0085 69 410 Glycoside Hydrolase AT3G07070 46.218 1.93e-94 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi01g0085 PK_Tyr_Ser-Thr 1.3e-46 CL0016