Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0079 ATGGACTCTGGTTGCATCTCCAGCGTCATCCACGGATATCAATCCAACCAAACGCCTGCTGCGCTCAATTATGATGAGTATACTGATCCCTTTGATGGAATTCAGATACACGAGCCGTTTATGGACTTTGCATCTGTGGATACAAACCTTGCCGGAAATCCTGCTTCCGTTAGTACGAATGTAGACTCTCCCTTGGACGAGACCGACTTCTCTGGCACCATGCTTGGCTACATAAACCAAGTGCTGATGGAAGAGGACATGGCAGACCAGCCCAGTATGTTTCATGATTCCTTGGCTCTTCAAGAGGCCGAGGAATCATTATACGAGGTTATTGGGAGTAAATACCCCTCCGATTCCTCCATTCAACCTCATCTTCCCAACTACCACCGTGTGGAGACCTTCTCTGAGGAATCTGTCTCATGCAACATCAGTGATCAGAGTAGTAGTGGCAGTTATGCAGCTAATGGTACCAACTCTGTTGAGTCCCAGTGGGGTAACTTGGACTTTACAGATTATAAACCTTCTCTACTGCAAGCCACATTTCCTGTAGATTTCGTTTTCCAGTCTCCTTCAACATCCACGGCACAGCTTTCCACCAACAATATGAGCAGCTCCAGGAATACTGGCCATAAATATAATGGGCTCGCGGGGAATTACAGTGCTGGGACTGGGTTCTCAGGCTCAACATTGCTTAGCATGAATGAGTCTCTGTTTCAATTTAAGAGGGGTGTGGAGGAAGCCAGTAAGTTTCTTCCAAAGGACAATCATTTGATTACTGACACAGGGCCCAACTTCATTTCTCCTTCGTTTGAAAATACTCTAGAGGCTGTGGTCAAGAAGGAGATATACGAGATGGAGTACGTAAATGCCGAGTTAAGAGGGAGCAGGAAGAACCATGAACGGGAAGATGAGATAGATTTAGAGGACAGGAGAAGCAGGAAGCAGGCAGCGGTTTACACAGATGAGAGTGAGCTATCAGAATTATTTGATAAGGTGCTCATTGGCACAGGCTGGGGGAAAGACCCACCTCCTATGTGTATCTGCCATGAAAATTGTAATCATGGAGCACACGGGAAAAAGGAAGAGGCAAACAAGAACAGTGATAGAAAAAGCCGCGTTAGAAGACAGAGTTATAATAACCACAATGAAGTGGTGGATCTAAGGGCATTGCTTATTCAATGTGCACAAGCTGTATCATCTGATGATCGTGGGACGTCTAATAAGCTATTACAGCAGATTAGGCAGCATTCTTCCTTGACAGGCAGTGGATCTCAGAGGCTGGCACACTGCTTCGCAAATGCCCTCGAGGCACGCTTGGCCGGCACCGGCTCTCAGATCTACTCCGCTCTATCCTCCAAAAGAACTTCTGCTTCAGACATGATAAAAGCATACCAAATGTACATCTCAGCTTGTCCATTCCAGAAGGTCGCAGTTATTTATGCAAACCATACAATTTTGCATCACGCCAATGAGGCGGAAACGCTTCACATCATACATTTTGGCATTCGTTATGGCTTCCAATGGCCTTCCTTTATCCTTCGTCTCTCCAAACGAACTGGCGGACCACCCAAGCTGCGCATTACAGGAATTGAACTCCCACAACCTGGTTTGAGGCCGGCAGAGAGAGTCCAAGAGACGGGGAGGCGCCTCGTGAGGTACTGTGAGCGCTACAATGTTCCATTTGAGTACAATGCTATTGCACAGAAATGGGAAACCATCAAGCTTGAAGACCTGAAGATAAAGAAAGATGAGCTCGTGGTTGTGAATTGTCAGAAGCGATTTAAGAATCTCCTTGATGAGACAGTAGTTGTGAATAGCCCTAGAGACACTGTTTTAAAGTTAATTAGGGAGGCAAACCCCAGTTTGTTCCTGCAGACTATAATCAACGGGAGCTATAATGCACCATTCTTTGTGACGCGTTTCCGGGAGGCTCTTTTCCATTACTCTTCCATGTTTGATATGCTTGACACAAATGTTGATGGGGGAGATCCCATGAGGTTAATGTTTGAAAAGGAGTTTCTTGGACAAGAGGTAACAAATATTATAGCTTGTGAGGGGTTAGAGAGGAGTGAGAGGCCTGAGACATACAAGCAATGGCAGATCCGGAACATGAGGGCAGGGTTCAGGCAGCTTCCTTTGGATCGACATCTGATGAGTAAATTAAGAGGCAAGTTGAGAGAAGCGTTCCACAGTGACTTCATGCTTGATGAAGACGGCAATTGGATGCTGCAAGGTTGGAAGGGCCGGATTATGTATGCTTCCTCCTGTTGGGTTCCTGCATAG 2283 0.4625 MDSGCISSVIHGYQSNQTPAALNYDEYTDPFDGIQIHEPFMDFASVDTNLAGNPASVSTNVDSPLDETDFSGTMLGYINQVLMEEDMADQPSMFHDSLALQEAEESLYEVIGSKYPSDSSIQPHLPNYHRVETFSEESVSCNISDQSSSGSYAANGTNSVESQWGNLDFTDYKPSLLQATFPVDFVFQSPSTSTAQLSTNNMSSSRNTGHKYNGLAGNYSAGTGFSGSTLLSMNESLFQFKRGVEEASKFLPKDNHLITDTGPNFISPSFENTLEAVVKKEIYEMEYVNAELRGSRKNHEREDEIDLEDRRSRKQAAVYTDESELSELFDKVLIGTGWGKDPPPMCICHENCNHGAHGKKEEANKNSDRKSRVRRQSYNNHNEVVDLRALLIQCAQAVSSDDRGTSNKLLQQIRQHSSLTGSGSQRLAHCFANALEARLAGTGSQIYSALSSKRTSASDMIKAYQMYISACPFQKVAVIYANHTILHHANEAETLHIIHFGIRYGFQWPSFILRLSKRTGGPPKLRITGIELPQPGLRPAERVQETGRRLVRYCERYNVPFEYNAIAQKWETIKLEDLKIKKDELVVVNCQKRFKNLLDETVVVNSPRDTVLKLIREANPSLFLQTIINGSYNAPFFVTRFREALFHYSSMFDMLDTNVDGGDPMRLMFEKEFLGQEVTNIIACEGLERSERPETYKQWQIRNMRAGFRQLPLDRHLMSKLRGKLREAFHSDFMLDEDGNWMLQGWKGRIMYASSCWVPA 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0079 760 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 321 752 IPR005202 -
Mibi01g0079 760 Pfam GRAS domain family 387 757 IPR005202 -
Mibi01g0079 760 ProSiteProfiles GRAS family profile. 378 758 IPR005202 -
Mibi01g0079 760 MobiDBLite consensus disorder prediction 294 314 - -
Mibi01g0079 760 MobiDBLite consensus disorder prediction 357 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0079 Mibi-ChrMibi01 910146 912428 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0079 74 760 GRAS Transcription Factor Family AT1G07530 53.032 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mibi01g0079 GRAS 1.6e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g0079 01 910146 912428 Mibi07g0145 07 2089142 2091481 CCT
Mibi07g0144 07 2072554 2074560 Mibi01g0079 01 910146 912428 CCT
Mibi01g0079 01 910146 912428 Mibi01g0079 01 910146 912428 ECH