Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi01g0072 | ATGGCGTCATCGAAAACGGCGAAGGTGCGGTGGGGCGAGCTTGATGAGGAGGATGGGGAGGATCTTGACTTTCTGCTGCCGGCGCGACAGGTGATAGGTCCTGATGAGAACGGTATAAAGAGGGTGATTGAGTACAAATTCAATGAGGATGGCAATAAGGTCAAGATTACCACCACCACCCGCACTCGAAAGCTTGCCAATGCTCGCCTCAGTAAGCGGGCCGTCGAGAGGCGATCCTGGCCTAAGTTTGGCGATGCTCTTCACGAGGATTTTGGTAGCAGGCTCACCATGGTTTCCACCGAAGAGATCCTCCTTGAACGACCTAGGGCCCCTGGTAGCAAAGCAGAAGAACCAAAGGTTGCTGGAGACCCGTTGGCACAATTCCAGAAAGGTGCTGTTCTCATGGTCTGTAGAACTTGTGGCAAGAAGGGCGATCACTGGACTTCAAGGTGTCCTTACAAAGATCTCGCCCAACCGGTTGAGGTATATGTTGATAAGCCTGCAGCTTCTGAAGCTGCAACTGCTGCATCTGGTCCAGCCAAGGGAGCATATGTTCCTCCTGGCCTGAGGGCAGGTGCAGAAAGGACTGGATCAGACATGCGTCGTAGGAATGATGAAAATTCTGTGCGAGTCACCAATCTCTCAGAAGACACAAGAGAGCCTGATTTACTCGAGCTGTTCCGTCCTTTTGGTGCAGTAAGCAGAGTCTATGTTGCTATCGATCAGAAGACTGGCATGAGCAGGGGATTTGGCTTTGTTAACTTTGTAAACAGGGAAGATGCGCAGAGAGCTATTAACAAGCTCAATGGATATGGGTACGACAATCTCATCCTTAGAGTTGAATGGGCCACCCCGAGGACAAACTAA | 867 | 0.5098 | MASSKTAKVRWGELDEEDGEDLDFLLPARQVIGPDENGIKRVIEYKFNEDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDALHEDFGSRLTMVSTEEILLERPRAPGSKAEEPKVAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPVEVYVDKPAASEAATAASGPAKGAYVPPGLRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN | 288 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi01g0072 | 288 | PIRSF | Transl_init_eIF-3_RNA-bind | 1 | 288 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Mibi01g0072 | 288 | SUPERFAMILY | RNA-binding domain, RBD | 205 | 287 | IPR035979 | GO:0003676 | |
Mibi01g0072 | 288 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G | 19 | 284 | - | - | |
Mibi01g0072 | 288 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 207 | 285 | IPR000504 | GO:0003723 | |
Mibi01g0072 | 288 | CDD | eIF3G | 37 | 155 | IPR024675 | - | |
Mibi01g0072 | 288 | Pfam | Eukaryotic translation initiation factor 3 subunit G | 30 | 156 | IPR024675 | - | |
Mibi01g0072 | 288 | CDD | RRM_eIF3G_like | 208 | 283 | IPR034240 | - | |
Mibi01g0072 | 288 | Hamap | Eukaryotic translation initiation factor 3 subunit G [EIF3G]. | 8 | 287 | IPR017334 | GO:0003743|GO:0005737|GO:0005852 | |
Mibi01g0072 | 288 | Gene3D | - | 166 | 288 | IPR012677 | - | |
Mibi01g0072 | 288 | FunFam | Eukaryotic translation initiation factor 3 subunit G | 172 | 288 | - | - | |
Mibi01g0072 | 288 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 209 | 275 | IPR000504 | GO:0003723 | |
Mibi01g0072 | 288 | MobiDBLite | consensus disorder prediction | 172 | 207 | - | - | |
Mibi01g0072 | 288 | SMART | rrm1_1 | 208 | 281 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi01g0072 | Mibi-ChrMibi01 | 878373 | 880239 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi01g0072 | 2 | 286 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 70.032 | 1.10e-157 | 440 |