Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0072 ATGGCGTCATCGAAAACGGCGAAGGTGCGGTGGGGCGAGCTTGATGAGGAGGATGGGGAGGATCTTGACTTTCTGCTGCCGGCGCGACAGGTGATAGGTCCTGATGAGAACGGTATAAAGAGGGTGATTGAGTACAAATTCAATGAGGATGGCAATAAGGTCAAGATTACCACCACCACCCGCACTCGAAAGCTTGCCAATGCTCGCCTCAGTAAGCGGGCCGTCGAGAGGCGATCCTGGCCTAAGTTTGGCGATGCTCTTCACGAGGATTTTGGTAGCAGGCTCACCATGGTTTCCACCGAAGAGATCCTCCTTGAACGACCTAGGGCCCCTGGTAGCAAAGCAGAAGAACCAAAGGTTGCTGGAGACCCGTTGGCACAATTCCAGAAAGGTGCTGTTCTCATGGTCTGTAGAACTTGTGGCAAGAAGGGCGATCACTGGACTTCAAGGTGTCCTTACAAAGATCTCGCCCAACCGGTTGAGGTATATGTTGATAAGCCTGCAGCTTCTGAAGCTGCAACTGCTGCATCTGGTCCAGCCAAGGGAGCATATGTTCCTCCTGGCCTGAGGGCAGGTGCAGAAAGGACTGGATCAGACATGCGTCGTAGGAATGATGAAAATTCTGTGCGAGTCACCAATCTCTCAGAAGACACAAGAGAGCCTGATTTACTCGAGCTGTTCCGTCCTTTTGGTGCAGTAAGCAGAGTCTATGTTGCTATCGATCAGAAGACTGGCATGAGCAGGGGATTTGGCTTTGTTAACTTTGTAAACAGGGAAGATGCGCAGAGAGCTATTAACAAGCTCAATGGATATGGGTACGACAATCTCATCCTTAGAGTTGAATGGGCCACCCCGAGGACAAACTAA 867 0.5098 MASSKTAKVRWGELDEEDGEDLDFLLPARQVIGPDENGIKRVIEYKFNEDGNKVKITTTTRTRKLANARLSKRAVERRSWPKFGDALHEDFGSRLTMVSTEEILLERPRAPGSKAEEPKVAGDPLAQFQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPVEVYVDKPAASEAATAASGPAKGAYVPPGLRAGAERTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRTN 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0072 288 PIRSF Transl_init_eIF-3_RNA-bind 1 288 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mibi01g0072 288 SUPERFAMILY RNA-binding domain, RBD 205 287 IPR035979 GO:0003676
Mibi01g0072 288 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 19 284 - -
Mibi01g0072 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 207 285 IPR000504 GO:0003723
Mibi01g0072 288 CDD eIF3G 37 155 IPR024675 -
Mibi01g0072 288 Pfam Eukaryotic translation initiation factor 3 subunit G 30 156 IPR024675 -
Mibi01g0072 288 CDD RRM_eIF3G_like 208 283 IPR034240 -
Mibi01g0072 288 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 8 287 IPR017334 GO:0003743|GO:0005737|GO:0005852
Mibi01g0072 288 Gene3D - 166 288 IPR012677 -
Mibi01g0072 288 FunFam Eukaryotic translation initiation factor 3 subunit G 172 288 - -
Mibi01g0072 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 209 275 IPR000504 GO:0003723
Mibi01g0072 288 MobiDBLite consensus disorder prediction 172 207 - -
Mibi01g0072 288 SMART rrm1_1 208 281 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0072 Mibi-ChrMibi01 878373 880239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0072 2 286 Eukaryotic Initiation Factors Gene Family AT3G11400 70.032 1.10e-157 440