Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0034 ATGTTTGGTTCAGCAGCATCGGAGAGGGATATGGATATGGATATAGATATGGATATGGATAGAGAAAGTGGACGACGGGAGGGGATGAAAGTGGAGAATCTGAGAGCGATGAAGGTGGTGGGTAAGGGGGCGATGGGCACCGTGTTCCTCGTCCACGACACCGTAGCCGATCCATCAGGCCGGCGACCCTTCGCCCTCAAGGTCCTCGACAAGTCCTCGTCCCTCGGCCGGTGGGAAATCCAAGTCCTGTCTCGGCTCAACCACCCTTTCCTTCCCTCCCTCTTAGGCACTTTTGAGGAGCAGCGATTGCTGGGGTGGGCCACCCCTTATTGCCCAGGCGGCGACCTCAACCTCCTCCGTCAATGTCAGAGCGATGGGGCCTTCTCCCCCTCCGTCATACGCTTCTATCTGGCGGAGATCCTGTGCGCTCTCCACCATCTTCATGCCCTTGGCATCGTCTATCGTGATCTGAAGCCCGAGAACGTTCTCATCCAGCACTCCGGCCACCTCACCCTCACCGACTTCGATCTCTCCCGCTCTCTCACCCCCACAACCGACCTCATTCACATTCACGGCACAAAAGGATTCAAGTCCGCACGAGTCATCCCCGTGAGAGTGAGCCAGCGTTCTAACTCCTTCGTCGGAACCGATGAGTACGTTTCCCCGGAGATGGTCCTGGGCGACGGGCACGAGTTCACCGTCGACTGGTGGGCCCTCGGCATATTGGCCTACGAGATGCTGTATGGCACGACGCCCTTTAAGGGAACCAATCGGAAAGAAACGTTCCGTAACGTTTTGACGAAAGCGCCGGTATTCCCTGGGAAGCCAACGGCGCTCACCCACTTGATCCAACGCCTGCTGCACAAGGACCCCACAAAGCGATTGGGTTACTCGCGGGGTGCCGCCGAGATCAAGGAGCACCACTTCTTCACAGGGCTCCGCTGGGACCTACTCACCCACGTTGTACGTCCTCCCTTTATTCCCTCCAAACCGGATGGCCACTGGGCGGACCTATCCGGGCTCGACATAGGGGAATACTTTCACAGGCTGAGGTCGCCCCCATCACCGGAGAGCGTGCGGGATACATCTTTTACCGAATTCTAG 1104 0.5788 MFGSAASERDMDMDIDMDMDRESGRREGMKVENLRAMKVVGKGAMGTVFLVHDTVADPSGRRPFALKVLDKSSSLGRWEIQVLSRLNHPFLPSLLGTFEEQRLLGWATPYCPGGDLNLLRQCQSDGAFSPSVIRFYLAEILCALHHLHALGIVYRDLKPENVLIQHSGHLTLTDFDLSRSLTPTTDLIHIHGTKGFKSARVIPVRVSQRSNSFVGTDEYVSPEMVLGDGHEFTVDWWALGILAYEMLYGTTPFKGTNRKETFRNVLTKAPVFPGKPTALTHLIQRLLHKDPTKRLGYSRGAAEIKEHHFFTGLRWDLLTHVVRPPFIPSKPDGHWADLSGLDIGEYFHRLRSPPSPESVRDTSFTEF 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0034 367 PANTHER FLIPPASE KINASE 1-RELATED 18 330 - -
Mibi01g0034 367 Pfam Protein kinase domain 37 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0034 367 Gene3D Transferase(Phosphotransferase) domain 1 115 329 - -
Mibi01g0034 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Mibi01g0034 367 ProSitePatterns Protein kinases ATP-binding region signature. 40 67 IPR017441 GO:0005524
Mibi01g0034 367 Gene3D Phosphorylase Kinase; domain 1 35 114 - -
Mibi01g0034 367 ProSiteProfiles AGC-kinase C-terminal domain profile. 311 367 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mibi01g0034 367 SUPERFAMILY Protein kinase-like (PK-like) 32 354 IPR011009 -
Mibi01g0034 367 FunFam Serine/threonine-protein kinase OXI1 208 329 - -
Mibi01g0034 367 SMART serkin_6 34 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0034 367 FunFam Serine/threonine-protein kinase OXI1 115 183 - -
Mibi01g0034 367 ProSiteProfiles Protein kinase domain profile. 34 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0034 Mibi-ChrMibi01 611305 612408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0034 28 367 AGC Kinase Gene Family AT1G51170 55.527 2.35e-140 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi01g0034 Pkinase 1.3e-51 CL0016