Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0032 ATGGATTGCTCTGCCTCTGCCTTCCTTTTCCTTCTTCCTCATTTGGAGCCCATACATACTCTGCCGCAACTCTTGTGTCCATCTCCGCTGTGCTCTCTCCCCCTGTATCATATCACATCATTTTCAGCTGTTGCTTTTCCTCCTTCACTTCACTCCCTCTTCCCCCTGGGGATTAAGCCGTGGTTTGGAAACGATTTGTTTCCTTCCCCTCCCTCTCTTCCATTGCATCTGATAATGGAGTCAGATCTGCAGCCCATGTTTTGCGATCAGCAGCAGCAGATTAATTCGGGCCTCACACGTTACCGATCGGCGCCCACTTCGTATTTCACCGATATCATCGACAAGGAGTGCTATGAGCACATATTCAACCGACCATCTAGCCCCGAAACGGAGCGAGTCTTCTCCCGCCTCATCACCAGTTTTGCTGACGACCCCCCACCCCAATCTCTCTCGCCCCTTACTGTGAAGCAAGAGGACGAACACAGCCACCACCCTCACCCTCAGAACAGCATGAATATTTACGACTCTGCTCCTCGTAATGTATACACCAGCTCAGCCCGACCGCCTCTGCCTAATCAGAGCCTCCCCTCCGCGAATCGGTTGCCTCCTATGAAGACTGGCCTCGGAAATGCTCCCTCTAATCTTACCAGGCATAACAGCTCCCCCGCCGGACTCTTTGCTAACTTCAACATTGATCCTGGTTATGCTGCGGCTGTGAGAGGCGTCGGAACTTTTGCGCCCGCAGATAACGCTACCGAAGGGACGAGCTTTCCTTCTGCAGGGACCTTGAAGAATCGACCTGCTTACTCGTCAGGCTTAATGCCATCCATAGCTGAAATTGGAGATAAAAACAGCATAGAATTAGATAGCCTTCAGAAGGATCCCTTTAGTGAAAGCCGGGACAACAATGACTTTATGTCGGCTTTCCCTGTAGATCCTTGGGACGATACTGCAATCATGTCTGACAATATTAGTGGTCAAAAAAGATTCAGAGATGATGATCATAATGATGCAAAACCGTTTTCTGGGTTCAACGCGGCTGAAGCCAAGAATGAGATGGGAAGCCAGGGCAGTGGACCTTCTCCATTGACTCATCACTTGAGCTTGCCAAAAACTGCAATGGAGATGGCATCCATAGAGAAGTTATTGCAGTACTCAGATTCTGTTCCATGTAAAATTCGTGCCAAGCGAGGCTGTGCCACTCACCCCCGGAGCATTGCAGAGCGGGTTAGGAGAACTAAAATTAGTGAACGCATGAGGAAACTACAAGATCTGGTTCCCAACATGGACAAGCAAACAAACACGGCAGACATGTTGGACTTGGCTGTTGACTACATTAAAGAGCTTCAAAAGCAGGTTCAGACACTTTCAGACAGCCGATCTAGATGGGAGAGAATCAGTTCTCGGATTAATAGGGCTGATATTAGTATGTGCGTGCAAAATGTTCGTCAGTTGGAAGCTGATGCGCTTGAGAAGTCAGAAGATGGGGTGGGGATGAAAAAATATCTTGATTCTGCGCGCGTTGACCATGAAGCGAAAGAAACCGCAAACATGTTGTTCCTTTGGGACACATGGTTGGCTTCTGGCTGGGCTCAAGGCTTGCCTTTGCCGCCTGAACTTCACCCAGTACCCATTCCCCAAATCTCTTAG 1650 0.4921 MDCSASAFLFLLPHLEPIHTLPQLLCPSPLCSLPLYHITSFSAVAFPPSLHSLFPLGIKPWFGNDLFPSPPSLPLHLIMESDLQPMFCDQQQQINSGLTRYRSAPTSYFTDIIDKECYEHIFNRPSSPETERVFSRLITSFADDPPPQSLSPLTVKQEDEHSHHPHPQNSMNIYDSAPRNVYTSSARPPLPNQSLPSANRLPPMKTGLGNAPSNLTRHNSSPAGLFANFNIDPGYAAAVRGVGTFAPADNATEGTSFPSAGTLKNRPAYSSGLMPSIAEIGDKNSIELDSLQKDPFSESRDNNDFMSAFPVDPWDDTAIMSDNISGQKRFRDDDHNDAKPFSGFNAAEAKNEMGSQGSGPSPLTHHLSLPKTAMEMASIEKLLQYSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQVQTLSDSRSRWERISSRINRADISMCVQNVRQLEADALEKSEDGVGMKKYLDSARVDHEAKETANMLFLWDTWLASGWAQGLPLPPELHPVPIPQIS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0032 549 SMART finulus 405 455 IPR011598 GO:0046983
Mibi01g0032 549 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 399 449 IPR011598 GO:0046983
Mibi01g0032 549 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 185 477 - -
Mibi01g0032 549 Coils Coil 446 466 - -
Mibi01g0032 549 MobiDBLite consensus disorder prediction 167 200 - -
Mibi01g0032 549 Pfam Helix-loop-helix DNA-binding domain 404 450 IPR011598 GO:0046983
Mibi01g0032 549 MobiDBLite consensus disorder prediction 141 216 - -
Mibi01g0032 549 FunFam Transcription factor bHLH130 family 400 468 - -
Mibi01g0032 549 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 402 464 IPR036638 GO:0046983
Mibi01g0032 549 Gene3D - 400 472 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0032 Mibi-ChrMibi01 565532 568915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0032 79 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 39.120 6.94e-66 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi01g0032 HLH 7.9e-10 No_clan