Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g0005 ATGGAAGGGGGAGGAGGAGGAGGCTCTCAGCCTGGTGACACCGTCATGTCGGAGGCAACGCAGCCTGATCCACGACAACAGCAGCAGCCAACGGCTGTGGGGATTGAGAATATCCCCGCTACTCTTAGCCATGGCGGTAGGTTCATCCAGTACAACATCTTCGGCAATATATTCGAAGTCACAGCCAAATACAAACCCCCCATCATGCCCATCGGTAAAGGCGCTTACGGTATCGTCTGTTCCGCTCTCAATTCCGAGACCAACGAGCACGTAGCCATCAAGAAGATTGCTAATGCATTTGACAACAAAATTGATGCTAAGAGAACCCTCCGCGAAATCAAGCTGCTCCGACACATGGATCATGAAAACGTTGTTGCGATCAGGGATATAATACCACCACCTCAGAGGGAAGCATTTAATGATGTTTACATTGCGTATGAGCTAATGGACACTGACCTCCACCAAATTATTCGATCAAATCAAGTATTATCAGAGGAGCACTGTCAGTATTTCCTGTATCAAATCCTACGTGGGCTGAAGTACATTCATTCGGCAAATGTTCTGCACAGGGACCTAAAGCCTAGCAATCTTCTCCTGAATGCCAACTGCGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTTACCTCTGAAACCGACTTTATGACTGAATATGTTGTTACAAGATGGTATCGTGCACCAGAGCTGTTGTTAAACTCCTCTGATTACACTGCAGCTATTGATGTATGGTCTGTTGGGTGTATATTCATGGAACTAATGGATAGAAAACCATTGTTTCCTGGTCGGGATCATGTGCATCAGTTACGTCTACTTATGGAGCTGATTGGCACCCCATCTGAAGCTGATTTGGGCTTTTTGAATGAAAATGCTAAGAGATACATTAGGCAACTACCACTTTACCATCGCCAGTCTTTCCAAGAAAAGTTTCCACATGTCCATCCTGCAGCTATTGATCTTGTTGAAAAAATGTTAACTTTTGATCCTAGACAAAGGATTACTGTTGAGGATGCACTGGCACATCCTTACCTGACATCTTTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCCTTTAGCTTCGACTTTGAGCAGCATGCACTGACTGAGGATCAGATGAAAGAGTTGATATATCGAGAGGCTCTTGCATTCAACCCTGAGTATCAGCATCACTGA 1197 0.4495 MEGGGGGGSQPGDTVMSEATQPDPRQQQQPTAVGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQVLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYHRQSFQEKFPHVHPAAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEDQMKELIYREALAFNPEYQHH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g0005 398 MobiDBLite consensus disorder prediction 1 30 - -
Mibi01g0005 398 SMART serkin_6 65 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0005 398 MobiDBLite consensus disorder prediction 13 30 - -
Mibi01g0005 398 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 63 351 - -
Mibi01g0005 398 CDD STKc_TEY_MAPK 58 393 - -
Mibi01g0005 398 FunFam Mitogen-activated protein kinase 149 377 - -
Mibi01g0005 398 SUPERFAMILY Protein kinase-like (PK-like) 70 358 IPR011009 -
Mibi01g0005 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Mibi01g0005 398 Gene3D Transferase(Phosphotransferase) domain 1 149 377 - -
Mibi01g0005 398 ProSiteProfiles Protein kinase domain profile. 65 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0005 398 Gene3D Phosphorylase Kinase; domain 1 48 387 - -
Mibi01g0005 398 ProSitePatterns MAP kinase signature. 100 203 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mibi01g0005 398 FunFam Mitogen-activated protein kinase 50 159 - -
Mibi01g0005 398 Pfam Protein kinase domain 70 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi01g0005 398 ProSitePatterns Protein kinases ATP-binding region signature. 71 95 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g0005 Mibi-ChrMibi01 97631 105621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g0005 5 397 MAP Kinase Gene Family AT2G43790 87.786 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mibi01g0005 Pkinase 8.1e-74 CL0016