Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g03138 ATGGGGATCTGCTGGAGTTCGACACCTAACGATCCAATTCCAACTGGAACAGTTACACCTTCAGGAATAGTATCTTATTCCCAGGCGGCCACCAGTGGCAGCTATGGTACTAGTAGTACTGCTACAACAACTACTACTTTTACTATTTCTTCTGGAAGTGGAAGCGGAAGCAGTAGTAACATGTCCTCCTCCATAAACAGAAGCAACTTCTCCTCCGTCTCTGATTATTCAATTGGTGGTCAGATCTTACCTACTTCTAATCTCAGGGTCTTCACTTTTGCTGAATTGAAGACTGCTACCAAGAATTTCAGACTCGATAATCTCCTTGGAGAAGGTGGTTTTGGTAAAGTCTACAAGGGATGGCTTGAATCTTCCAGGAATTCTAGTGGAACCACCGTTGCCGTCAAAAAGTTGAACACTGAAGGCTACCAAGGCCTCGAGGAATGGCAGTCAGAAATACATTTTCTGGGACGTCTTTATCATCCTAACCTTGTTAAGCTTTTGGGATACTGTTATGAGGAAACAGAGCTTCTTCTTGTCTATGAATACATGCAGAAAGGCAGTTTGGAGAATCATCTCTTTGGAAGGGGTGCTCTTGTTCAACCACTTCCTTGGGACCTCAGACTTAAGATAGCAATTGGTGCTGCCTGTGGCCTTTCCTTCTTACATACTTCCGATAGAGAAATTATTTACAGAGATTTTAAGGCCTCCAATATATTGCTTGATGGGTCCTATAATGCAAAGATATCAGATTTTGGACTTGCAAAGTTGGGTCCTTCAGCTAGTCAATCCCATTTGTCAACAACAGTGATGGGAACACCTGGTTATGCAGCTCCTGAATATATGCAAACAGGGCATCTATATGTAAAGAGTGACGTCTATGGGTTTGGAGTTGTTTTAGTCGAGATACTCACAGGCCAACGAGCAATTGATCTCAACCGTCCAAGCGGCCGTCACAGTCTAACCGACTGGATCAAACCAGAATTACAAGATAGAAGAAAATTGAAGAAGGTCATGGATCCTCAATTGAAAGATATGTATCCAATCAAAGCTGCACTTCCTATAGCTAAGCTTGCTTCAAGATGCCTTGCACCTGAGCCCAAAATGCGCCCATCCATGAAGGAAGTTTTGCAAATGTTGCAGGGAATTCAAGCTGCCACTAACAAAACCGTGGAGGTTAGGGGTGAAAATTAA 1194 0.4313 MGICWSSTPNDPIPTGTVTPSGIVSYSQAATSGSYGTSSTATTTTTFTISSGSGSGSSSNMSSSINRSNFSSVSDYSIGGQILPTSNLRVFTFAELKTATKNFRLDNLLGEGGFGKVYKGWLESSRNSSGTTVAVKKLNTEGYQGLEEWQSEIHFLGRLYHPNLVKLLGYCYEETELLLVYEYMQKGSLENHLFGRGALVQPLPWDLRLKIAIGAACGLSFLHTSDREIIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHLSTTVMGTPGYAAPEYMQTGHLYVKSDVYGFGVVLVEILTGQRAIDLNRPSGRHSLTDWIKPELQDRRKLKKVMDPQLKDMYPIKAALPIAKLASRCLAPEPKMRPSMKEVLQMLQGIQAATNKTVEVRGEN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g03138 397 ProSiteProfiles Protein kinase domain profile. 103 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo7g03138 397 PANTHER OS01G0588500 PROTEIN-RELATED 58 384 - -
Mepo7g03138 397 ProSitePatterns Protein kinases ATP-binding region signature. 109 137 IPR017441 GO:0005524
Mepo7g03138 397 Pfam Protein tyrosine and serine/threonine kinase 105 380 IPR001245 GO:0004672|GO:0006468
Mepo7g03138 397 Gene3D Phosphorylase Kinase; domain 1 79 183 - -
Mepo7g03138 397 FunFam Serine/threonine-protein kinase BIK1 70 183 - -
Mepo7g03138 397 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 184 393 - -
Mepo7g03138 397 CDD STKc_IRAK 109 383 - -
Mepo7g03138 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Mepo7g03138 397 SUPERFAMILY Protein kinase-like (PK-like) 72 380 IPR011009 -
Mepo7g03138 397 Gene3D Transferase(Phosphotransferase) domain 1 184 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g03138 Mepo-Chr7 42234107 42236363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g03138 51 393 Glycoside Hydrolase AT3G07070 44.699 1.04e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo7g03138 PK_Tyr_Ser-Thr 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g03138 - - mtr:11430234 672.93