Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g03134 ATGAAAGGTGGAGATAATAATTCCTCCGATCATCCATGTTCTGTTACTGGTAAGAAGAAGCGTAAGGAATTCGGTGGGGAATCATCATCCAACAACATTGCTCGTACTTGCACTGAATGCGGTAAGATATTCTGGTCATGGAAGGCTCTTTTTGGTCACATGCGTTGTCATCCTGAGCGTCAATGGAGAGGCATTAACCCTCCTCCTAATTTCAGAAGACTACAACAACACTCTTCCATCAACACTCCAGAAGAACAGGAGGTTGCCGCTTCTTTGCTCTTACTTGCAAATTCAAATCCAAAGAACAAGAACAAGAAAGCAACATTGGTGGATGATCAGTTTGTGTGTTCGTGTTGCAACAAAGTATTTGGATCCCATCAGGCACTTGGAGGACACAGGGCTAGTCACAAGAATGTCAAGGGTTGTTTCGCCAATACAACTTCATCACCAACAATAACCGCTTCTTCTACTCCTCAAGGAATTGGAGGAGATCATGCTGCTGTTGCTGTTGCTGTTGATTCATCGGATCCAATGATGCCTCGTGGTGGTGGTGACGTGGAAGGGGAAGCGGTTAATAGCAGTAATAATAACGAGATTAATGGAGTCGGACACAAGTGTAGCATATGTTTGAGGGTATTTAGCACTGGACAAGCACTCGGTGGTCATAAGAGGTGTCATTGGGAAAAAGGGGAACCCACCACACCAGCAGTACCATTCGATTCTTCTTCTACTGCAACTGCAACTGCAACAAACAACATGTCTAGTAGTGTTAATGTCGTTGATTTGAATTTCCCTTTTCCACCTCCTGATGATGATAATCATCCTCATTCTTCTTCTCCCCTCACTCTTGATTTGAGGTTGGGACTTTAA 870 0.4391 MKGGDNNSSDHPCSVTGKKKRKEFGGESSSNNIARTCTECGKIFWSWKALFGHMRCHPERQWRGINPPPNFRRLQQHSSINTPEEQEVAASLLLLANSNPKNKNKKATLVDDQFVCSCCNKVFGSHQALGGHRASHKNVKGCFANTTSSPTITASSTPQGIGGDHAAVAVAVDSSDPMMPRGGGDVEGEAVNSSNNNEINGVGHKCSICLRVFSTGQALGGHKRCHWEKGEPTTPAVPFDSSSTATATATNNMSSSVNVVDLNFPFPPPDDDNHPHSSSPLTLDLRLGL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g03134 289 MobiDBLite consensus disorder prediction 264 289 - -
Mepo7g03134 289 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Mepo7g03134 289 MobiDBLite consensus disorder prediction 1 29 - -
Mepo7g03134 289 SUPERFAMILY beta-beta-alpha zinc fingers 36 136 IPR036236 -
Mepo7g03134 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Mepo7g03134 289 Gene3D Classic Zinc Finger 36 136 - -
Mepo7g03134 289 Pfam C2H2-type zinc finger 36 59 - -
Mepo7g03134 289 Pfam C2H2-type zinc finger 114 137 - -
Mepo7g03134 289 Pfam C2H2-type zinc finger 204 228 - -
Mepo7g03134 289 ProSitePatterns Zinc finger C2H2 type domain signature. 116 136 IPR013087 -
Mepo7g03134 289 ProSitePatterns Zinc finger C2H2 type domain signature. 206 226 IPR013087 -
Mepo7g03134 289 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 14 289 - -
Mepo7g03134 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 141 IPR013087 -
Mepo7g03134 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 204 231 IPR013087 -
Mepo7g03134 289 SMART c2h2final6 35 57 IPR013087 -
Mepo7g03134 289 SMART c2h2final6 204 226 IPR013087 -
Mepo7g03134 289 SMART c2h2final6 114 136 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g03134 Mepo-Chr7 42170796 42171665 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g03134 33 289 C2H2 Transcription Factor Family AT4G35280 43.911 2.80e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo7g03134 zf-C2H2_6 1.2e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g03134 - - mtr:11423758 326.25