Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g03113 ATGGCAACCATTATTCCACAAAATGATTCCAAAAGTGTTAGCCCAAACTTGATCATTGATTCAGACCCTTTGAACTGGAATTCAGCTGCTAATTCACTCAAGGGTAGCCATTTTGATGAAGTAAAACGTATGGTAGCAGAATACAAGAAGCCAGTAATATGTCTTGGTGGGGTGGGGACACTAACTATATCTCAGGTGGCTGCTGTTTCTAACAGTAGCTCACATGTTAAGGTTGAACTCTCAGAGTCTGCAAGGGCTGGTGTTGAAGCTAGCTGCGAGTGGATCGCAGAAAACATTGACAAAGGTACTCCAATTTATGGTGTTACCACTGGCTTTGGTGCTGCCTCATATAGAAGAACTGAACAAGGCTTTGCTCTTCAGAAGGAGATGGTCAGGTTTTTAAACTGTGCAATATTTGGGCGTGAAAGTGAGTTGTCTCATACACTGCCTTCGTCAGCAACAAGAGCAGCTATGCTTGTGAGGGTTAATACCCTTCTACAAGGCTATTCAGGCATTAGATTTGAAATCTTAGAAGCTATCATCAAGCTCCTCAACCATAATGTCACACCAATCTTGCCATTACGCGGCACAGTTACCGCTTCCGGTGATCTTATTCCTCTGTCCTATATTGCCGCATTGCTAACCGGTAGGCGAAATTCCAGAGCTGTTGGACCCTCAAAAGAGTCCCTTAATGCCAAGGAAGCTTTCCATTTAGCAGGCCTGAGTTCTGGGTTCTTCGAGTTGAAGCCGAAGGAAGGTCTTGCTCTTGTAAACGGTACAGCTGTTGGATCTGGTGTGGCTTCTGCGGTTCTATTCGAGGCAAACATATTAGCTTTGTTGTCAGTAGTTCTATCAGCAGTTTTCACTGAAGTCATGCAAGGGAAGCCAGAATTTACACACCATCTTATACACAAGCTGAAGTTTCATCCGGGTCAAATCGAGGCGGCTGCTATTATGGAACACATTTTAGACGGAAGCTCTTATATCAAAAACGCCAAACAGCAGCAGCCAGATCCATTGCAGAAGCCTAGAAAAGATCGTTATGCTCTTGTAACTTCTCCTCAGTGGCTCGGTCCACAGATTGAAGTTATCCGGTTTTCGACCAAATCGATTGAAAGGGAGATAAATTCAGTGAATGACAATCCTCTGATTGATGTCGCAACGGATAAGGCTCTAAATGGTGGTAATTTCCAAGGCACCCCAATTGGAGTTTCGATGGATAATGTACGTTTAGCTATTGCTTCTATTGGAAAACTTGTCTTTGCGCAATTTACTGAGCTAGTCAATGACTTGTATAACAACGGGCTGCCCTCAAATCTTTCTGCTGGTAGAAACCCAAGTCTGGATTATGGTTTTAAGGCCTCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATTTAGCAAATCCTGTGACAAGTCATGTGCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTTTGGGGTTGATTTCTGCTTTGAAAACAGTGGAAGCCATTGAGATATTGAAGCTGATGTCTTCCACATATTTGGTTGCACTGTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTTAAGAACACTGTCAAGAAAACTGTAAGCAGAGTTCTTAAGCAGACATTAATCATAGACGACATAGAAGAAACTAATCCATTTAGATTATGTGAGGAAAATTTGCTCAAAGTGGTTGAAAGAGAATATGTATTCTCCTACATAGATGATCCCTTTAATGTTACGTACCCACTGATGCCGAAACTAAAGCAAGTACTTTACGAGCATGCACACATCAGTGCCATAAATAATAAGAATGCGAAAACTTCAACATTTGAGAAAATTGGTGCTTTTGAGGATGAACTGAAGTCACTTTTGCCAAAGGAAGTTGAAAGTGCAAGGGTTGCATTTGAGAAGGGCAATTCTGAAATTCCAAACAGAATTAAGGAATGTAGGTCATACCCACTATACAAGTTTGTGAGGGAAGAACTAAAGATAGGGTTGCTGACAGGAGAAAAGGATATCACACCAGATGAGGAATTTGAAAAAGTATTTACAGCAATGTGTCAAGCAAAGATTGTTGATCCAATTCTGGAATGTCTTGGTGATTGGAAAGGAGTTCCCATCCCAATATAA 2139 0.417 MATIIPQNDSKSVSPNLIIDSDPLNWNSAANSLKGSHFDEVKRMVAEYKKPVICLGGVGTLTISQVAAVSNSSSHVKVELSESARAGVEASCEWIAENIDKGTPIYGVTTGFGAASYRRTEQGFALQKEMVRFLNCAIFGRESELSHTLPSSATRAAMLVRVNTLLQGYSGIRFEILEAIIKLLNHNVTPILPLRGTVTASGDLIPLSYIAALLTGRRNSRAVGPSKESLNAKEAFHLAGLSSGFFELKPKEGLALVNGTAVGSGVASAVLFEANILALLSVVLSAVFTEVMQGKPEFTHHLIHKLKFHPGQIEAAAIMEHILDGSSYIKNAKQQQPDPLQKPRKDRYALVTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLIDVATDKALNGGNFQGTPIGVSMDNVRLAIASIGKLVFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAIEILKLMSSTYLVALCQAIDLRHLEEIFKNTVKKTVSRVLKQTLIIDDIEETNPFRLCEENLLKVVEREYVFSYIDDPFNVTYPLMPKLKQVLYEHAHISAINNKNAKTSTFEKIGAFEDELKSLLPKEVESARVAFEKGNSEIPNRIKECRSYPLYKFVREELKIGLLTGEKDITPDEEFEKVFTAMCQAKIVDPILECLGDWKGVPIPI 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g03113 712 PANTHER HISTIDINE AMMONIA-LYASE 17 712 IPR001106 -
Mepo7g03113 712 Gene3D - 526 647 IPR023144 -
Mepo7g03113 712 Pfam Aromatic amino acid lyase 61 530 IPR001106 -
Mepo7g03113 712 SUPERFAMILY L-aspartase-like 22 712 IPR008948 GO:0003824
Mepo7g03113 712 Gene3D Fumarase/aspartase (Central domain) 261 707 - -
Mepo7g03113 712 CDD PAL-HAL 59 523 IPR001106 -
Mepo7g03113 712 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841
Mepo7g03113 712 Gene3D - 14 260 IPR024083 -
Mepo7g03113 712 FunFam Phenylalanine ammonia-lyase 13 260 - -
Mepo7g03113 712 NCBIfam phenylalanine ammonia-lyase 22 702 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g03113 Mepo-Chr7 41945092 41947818 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g03113 14 712 Monolignol Biosynthesis Gene Families AT2G37040 71.469 0.0 1056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g03113 K10775 - gmx:100787872 1195.26