Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g03110 ATGGCGAACATCATGACTCACCACCTTCCTTGTGACGCTGACGGTGTATGCATGGTCTGCAAACAAAAACCATCAGAAACCGAAACACTTCATTGCAAAACCTGCACAGCACCATGGCATGTTCCTTGTCTCCCTCTTGTTCCAACAACAACTGAAATGCTCGATTGGTTGTGTCCCGATTGTGCTCAACCTAGTGATGTTGTTGCTGCTGCTGCTGCTCCTTCTGTTGCGGGGGATCTTGTCTCCGCTATTCGCGCTATCGAGAATGATCCTTCGTTGACGGAGGAAGAGAAGAGAAAGAAACGTCAAGAGTTACATGGTGGATCTTTGAAAGAGGAGGATGAGGTTAATGTTAGGAAGAGTGGTGTTCTTGATATCTTCGATAAGAGTTTTAACTGTTCTTTTTGTATGAAGTTGCCTGAGAGACCTGTTACTACTCCATGTGGGCACAATTTCTGCTTGAAGTGTTTTGAGAAATGGGTTGGGCAACAAGGGAAACGAACTTGCTCAAACTGCAGGACTGCAATTCCACCAAAGATGGCGAGTAATCCAAGAATCAATGCACAGTTGGCGATTGCGATCCGTATGGCCAAGCTAGCTCGATCAGAGGGTGTCGGTGGAAGCACTGCTCCAAAAAATTATCAAGTTGTTCTCAATGATGAGCGCCCCGACACTTGCTACACCACTGAGAGAGCAAAGAAAACAGGAAAGGCTAATGCTTGCAGTGGAAAAATCTTTGTGACTATTCCAAAGGATCATTTTGGACCAATCCTTGCTGAGTATGATCCTAATAGGAACCGTGGGGTTCTTGTTGGTGATACTTGGGAGGATAGGATGGAATGTAGGCAATGGGGAGCTCATTTTCCCCATGTCGCTGGCATTGCCGGTCAGAGTGGCCATGGGGCTCAATCTGTCGCTCTCTCGGGTGGTTATGTAGATGATGAGGATCACGGGGAGTGGTTCCTTTACACCGGAAGCGGTGGAAGGGATCTCAGTGGGAATAAGCGTACAAACAAAAACCAGTCATTTGACCAGAAGTTTGAAAATATGAACGAGGCTTTGCGAACCAGTTGCCGAAAAGGCTATCCTGTTCGTGTTGTTAGGTCCCACAAGGAGAAACGTTCCTCTTATGCACCTGAAGCAGGAGTGAGATATGATGGGGTATACAGAATTGAGAAATGTTGGCGCAAAGTTGGAATACAAGGTCATAAGGTCTGCAGGTATTTGTTTGTGAGGTGTGACAATGAGCCAGCTCCATGGACAAGTGATTTAACTGGAGACCGTCCTCGCCCACTACCTACAATTAAGGAGTTTAAGGGTGCAGTTGATATTACTGAAAGAAAGGATGATCCATCATGGGACTTTGATGAGGAAAAGGGCTGTTGGTTGTGGAAGAAGCCTCCACCACAAAGTAAGAAGCCGATGAACATTGTGGATCCTTTTGATCCAACAAAAATTAAAATTGTCAGGCCAAAAGCTATAAAGCCGTCCTTCAAAATCAAGGATAGGCTATTGAAAGAGTTTGGTTGCAATATCTGTCGCAAGGTGCTGGCTTCCCCTCTTACTACACCTTGTGCTCACAACTTCTGCAAAGGCTGCTTGGAGGGTGCCTTTTCTGGCCAAAGCTATATCAGGAACAGGACAACTCAAAGTGGACGCAGTTTGCGGACACAGAAGAACGTTATGAAATGTCCTACTTGTGCAACTGACATAGCTGAGTATCTTCAGAATCCACAGATCAACAGGGAAATGATGGGTGTGATAGAATCACTCCAGCGACAGGCTGAACAACAAGAGGAACAGATGGAGGAGAATTCTGGAGAATCAAGTGCTAAGAGTGAAGAAAATGACAAACTGGATGAGGAGACCGAGGTCTCAAAATCCTCTGATTCGAGTGAGAAAGTCGTGGAGGAAATCAACGAGGATGATCTGAATCCTCCACAGAAGAAGAGGAAAGGCGATGATGGCAAGGCTGTGGTCAATGTGGAGGAACATGCTGATGAGGCAGGAGTGGAAAGCAAAACAGTGGCTTGCAACTAG 2040 0.4608 MANIMTHHLPCDADGVCMVCKQKPSETETLHCKTCTAPWHVPCLPLVPTTTEMLDWLCPDCAQPSDVVAAAAAPSVAGDLVSAIRAIENDPSLTEEEKRKKRQELHGGSLKEEDEVNVRKSGVLDIFDKSFNCSFCMKLPERPVTTPCGHNFCLKCFEKWVGQQGKRTCSNCRTAIPPKMASNPRINAQLAIAIRMAKLARSEGVGGSTAPKNYQVVLNDERPDTCYTTERAKKTGKANACSGKIFVTIPKDHFGPILAEYDPNRNRGVLVGDTWEDRMECRQWGAHFPHVAGIAGQSGHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQKFENMNEALRTSCRKGYPVRVVRSHKEKRSSYAPEAGVRYDGVYRIEKCWRKVGIQGHKVCRYLFVRCDNEPAPWTSDLTGDRPRPLPTIKEFKGAVDITERKDDPSWDFDEEKGCWLWKKPPPQSKKPMNIVDPFDPTKIKIVRPKAIKPSFKIKDRLLKEFGCNICRKVLASPLTTPCAHNFCKGCLEGAFSGQSYIRNRTTQSGRSLRTQKNVMKCPTCATDIAEYLQNPQINREMMGVIESLQRQAEQQEEQMEENSGESSAKSEENDKLDEETEVSKSSDSSEKVVEEINEDDLNPPQKKRKGDDGKAVVNVEEHADEAGVESKTVACN 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g03110 679 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 199 IPR013083 -
Mepo7g03110 679 ProSitePatterns Zinc finger PHD-type signature. 17 61 IPR019786 -
Mepo7g03110 679 ProSiteProfiles YDG domain profile. 264 412 IPR003105 -
Mepo7g03110 679 SUPERFAMILY PUA domain-like 238 434 IPR015947 -
Mepo7g03110 679 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 75 IPR013083 -
Mepo7g03110 679 ProSitePatterns Zinc finger RING-type signature. 525 534 IPR017907 -
Mepo7g03110 679 CDD RING-HC_ORTHRUS_rpt1 130 177 IPR047498 -
Mepo7g03110 679 Pfam RING-type zinc-finger 510 551 IPR027370 -
Mepo7g03110 679 Coils Coil 581 608 - -
Mepo7g03110 679 ProSiteProfiles Zinc finger PHD-type profile. 14 64 IPR019787 -
Mepo7g03110 679 SMART G9a_1 259 416 IPR003105 -
Mepo7g03110 679 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 498 639 IPR013083 -
Mepo7g03110 679 ProSiteProfiles Zinc finger RING-type profile. 510 567 IPR001841 -
Mepo7g03110 679 MobiDBLite consensus disorder prediction 92 113 - -
Mepo7g03110 679 Pfam Zinc finger, C3HC4 type (RING finger) 133 172 IPR018957 GO:0046872
Mepo7g03110 679 ProSiteProfiles Zinc finger RING-type profile. 133 173 IPR001841 -
Mepo7g03110 679 MobiDBLite consensus disorder prediction 596 659 - -
Mepo7g03110 679 Gene3D - 235 429 IPR036987 -
Mepo7g03110 679 SMART PHD_3 16 62 IPR001965 -
Mepo7g03110 679 SMART ring_2 510 567 IPR001841 -
Mepo7g03110 679 SMART ring_2 17 61 IPR001841 -
Mepo7g03110 679 SMART ring_2 133 172 IPR001841 -
Mepo7g03110 679 FunFam E3 ubiquitin-protein ligase ORTHRUS 2 235 430 - -
Mepo7g03110 679 MobiDBLite consensus disorder prediction 592 659 - -
Mepo7g03110 679 SUPERFAMILY RING/U-box 499 580 - -
Mepo7g03110 679 SUPERFAMILY FYVE/PHD zinc finger 3 63 IPR011011 -
Mepo7g03110 679 Pfam SAD/SRA domain 267 415 IPR003105 -
Mepo7g03110 679 SUPERFAMILY RING/U-box 125 181 - -
Mepo7g03110 679 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 4 611 IPR045134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g03110 Mepo-Chr7 41917432 41922336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g03110 8 602 C2H2 Transcription Factor Family AT5G39550 59.603 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g03110 K10638 - gmx:100786796 916.761