Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g03096 ATGGGGAGTAATAGTAGAGGAAAAGATGGTGAAGGAACTTCTGGAATTAACGGGGTTGATGTTGATGATGATGATAGCTTTGAATATTTACAAGAGATGAATTTTGTGCCTTATGAAACACTTCTTCAAAATAACATGAATACCAATGGTTTTGTAGCTCCCTTTGTCACGCAACAGGTTCCTGTGATTGTCATGCAAAGACCTGGAATGATGACACATCCACAAGCATTGACGCAAAACAGATATGTAGAAACAGTGATTCATGAGAGGTTGAAAAGTGTTAGGATCACATGGATTCATGGAGGCACCAATGTTTCTATTGCAGGATCATGGAACAACTGGGAGACAGTGGAGGCCTTGCTGAGAGTAGGTCAACATTTTGTGATTGTTAAAACACTTCCTATAAGTATCTATTATTACCGTTTCATTGTCGATGGCCAATGGACACATGCTCCAGAGTTTCCATCTGATCTTGATGATTCTGGTTATGTCTACAATATATTGGATTTGCAGGATTATATCCCACAAAGACTGCAAAAATCTGAAGATCCACAATCGCCGCCATCGAGTTACGATAACATATTCCTAAATGAAGATGAATTCAACAAGCCTCCCCCAGAATTACCACCACAAATACCAGTGACAATAAAACAAGAAGAGGTTTCCACAAGCAATATTGATCAAGTCCCTAGTTCTACACATGTGGATCTAAATCATCTATACATCAACAAATCTGAAGGTGATCAATTTGTAACACTAAGATCAACTCATAGGTTTCAACACAAATTTGTCACCACCGTACTTTACAAGTCCCTTCAAAGGGAAAGATGA 831 0.3863 MGSNSRGKDGEGTSGINGVDVDDDDSFEYLQEMNFVPYETLLQNNMNTNGFVAPFVTQQVPVIVMQRPGMMTHPQALTQNRYVETVIHERLKSVRITWIHGGTNVSIAGSWNNWETVEALLRVGQHFVIVKTLPISIYYYRFIVDGQWTHAPEFPSDLDDSGYVYNILDLQDYIPQRLQKSEDPQSPPSSYDNIFLNEDEFNKPPPELPPQIPVTIKQEEVSTSNIDQVPSSTHVDLNHLYINKSEGDQFVTLRSTHRFQHKFVTTVLYKSLQRER 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g03096 276 SUPERFAMILY E set domains 91 171 IPR014756 -
Mepo7g03096 276 MobiDBLite consensus disorder prediction 1 20 - -
Mepo7g03096 276 CDD E_set_AMPKbeta_like_N 93 169 - -
Mepo7g03096 276 SMART AMPKBI_2 184 272 IPR006828 GO:0005515
Mepo7g03096 276 Pfam Glycogen recognition site of AMP-activated protein kinase 94 171 IPR032640 -
Mepo7g03096 276 SUPERFAMILY AMPKBI-like 174 271 IPR037256 -
Mepo7g03096 276 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 274 IPR043554 -
Mepo7g03096 276 Gene3D Immunoglobulins 86 173 IPR013783 -
Mepo7g03096 276 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 202 270 IPR006828 GO:0005515
Mepo7g03096 276 Gene3D - 178 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g03096 Mepo-Chr7 41828056 41830738 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g03096 93 172 Protein tyrosine phosphatase (PTP) family AT3G01510 33.735 6.70e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g03096 K07199 - gmx:100786269 337.421