LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo7g03055	ATGGTCTTGATTGATCAAAAGCGAAGAGGAGAAGTTCGTGTTTCGAGTGGACGATTCAGAACGGTTGTGTTTGAGTCTGATCCTGATCAGTTGAAAAGTGCTAGAGAAGATATCAAGGAGCTTCTTGGGACTAAGTTCTGTCATCCTCTTATGATCAGTATCCAAAAAGTACCCTCCACCTCTTCAGTTTCTGGATTTCATGATAGTGTTGTTTCTGAATCCACTCTGTTTTCGTTTATCTGTAGGGATTGTGGAAAACAAGTATACTTAGGTGGATTTGATACCGCGCATGCTGCGGCAAGAGCATATGATCGAGCTGCGATAAAGTTTCGTGGCGTGGATGCGGATATTAATTTCAATGTCAGTGATTATGATGAAGATATAAAGCAGATGAATAACTTTACAAAGGAAGAGTTTGTGCATATTCTGCGTAGACAGAGTACTGGCTTCTCAAGGGGAAGTTCTAAATACAGAGGAGTTACTCTGCATAAATGTGGACGATGGGAAGCTCGTATGGGACAGTTTCTTGGGAAGAAAGCGTATGATAAGGCTGCTATAAAATGCAATGGAAGGGAAGCAGTTACAAATTTTGAGGCTAGTTCTTATGAAGGAGAGTTAACTTCCCAGGCTGATAAACATGGCACTACTTATTTACCATTGAGGCTCACCTTGTTTTTGTTTTTATAA	687	0.4047	MVLIDQKRRGEVRVSSGRFRTVVFESDPDQLKSAREDIKELLGTKFCHPLMISIQKVPSTSSVSGFHDSVVSESTLFSFICRDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNVSDYDEDIKQMNNFTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEASSYEGELTSQADKHGTTYLPLRLTLFLFL	228

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo7g03055	228	Gene3D	AP2/ERF domain	65	122	IPR036955	GO:0003700\|GO:0006355
	Mepo7g03055	228	SUPERFAMILY	DNA-binding domain	84	122	IPR016177	GO:0003677
	Mepo7g03055	228	SMART	rav1_2	82	126	IPR001471	GO:0003700\|GO:0006355
	Mepo7g03055	228	SMART	rav1_2	156	204	IPR001471	GO:0003700\|GO:0006355
	Mepo7g03055	228	ProSiteProfiles	AP2/ERF domain profile.	7	120	IPR001471	GO:0003700\|GO:0006355
	Mepo7g03055	228	PANTHER	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	83	207	-	-
	Mepo7g03055	228	CDD	AP2	155	200	IPR001471	GO:0003700\|GO:0006355
	Mepo7g03055	228	SUPERFAMILY	DNA-binding domain	155	199	IPR016177	GO:0003677

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo7g03055	Mepo-Chr7	41400422	41403005	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo7g03055	83	226	AP2-EREBP Transcription Factor Family	AT4G36920	71.069	3.29e-65	206

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo7g03055	K09284		-	sly:101259280	241.121

Showing 1 to 1 of 1 entries