Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g03035 ATGTCTGTGATTGTGAATGGAAGAGTTTCTTGTTCAAATGGAAGATGTTCATCACCAAAAATCAAGTCTTGGAAAGGAAATGAGTCTTTGCATGTGTCTAATTCTAGTACAACATGTCGGAGGAAACTGTTTCTGTTGCTGTTTTGGGTTTTTGGTGCTGTTGTTGCTATAGGGAGTGTTTGGTTTATGTTTAGTACCTTCAACTTTAAGCATTTTATTAAAGAAACAGCTTGTGAAAAGAGTACACAAACCTTGTTACAACGCTACAATGTCAGTAGGAAACAGCTTCATGTTTTGGCCTCCTTGTTCTCAGGATCAGATCAGATTTTGTCCAATTGTATTGATGAAAGGAGACTTCAAATGTTGTTAAGTAGTGACATAGTCAACACTCCACAGTTAATGTGTCCAAAGAATCTGGACTTACAAAAGGAGCATAGTTATGTTGCAGAATCTGTAGAACAATGCCCAATTCTTGCTGATTTTGTTCACACGAGGCTTGGATTATCATTCCCTTGGAAAGCATATGTAACATTGGACTCTGCACTTTTGTCCGATTTGGTTAACGTTTTGCTCCGTGGAAAGGTGATGAGGGTGTGTGCAATTGTGGATAATGTGAATTTATCTAGTTTAATTAAAGGATGTTGTTTGGTCCTTATTGGCATTATACTGTCCCACAAGTTGTCTGGCTTCTGTTTACTAAGGAAGAATCAAAAGCAGAAGGTAGTTAAGGAGCATCCAACTGCTCCACAAAAGCGGATTCAACATTGTATGCTCGGTCATTCAAAGGCTACTGGTTGGCGGAGAAAAAAGTTGCTAGTTATTTTTATGTCAGTTGGAATCCTTGGTTCTGCATGGTTATTTAGGTACATGAGTTCAGACATTGCGCAAAGAGGAGAAGAAATGCTTGCCACTATGTGTGACGAGAGAGCCCGTATGTTGCAAGATCAATTTAACGTGAGCATGAACCATGTCCATGCTCTCGCTATTCTTGTGTCTACATTTCACCATGGTAAACATCCTTCTGCAGTTGACCAGAAAATATTTGGAGAATATACAGAGAGTTCGGCATTTGAGAGACCACTTACTAGCGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGGATGCATTTTGAGAAGCAGCATGGTTGGACAATTAAGAAAATGGAAACTGAGAACGAGGCATTAGTTCAAGAATGTATTCCAGAAAACTTGGATCCAGCGCCCATTCAAGATGAATATGCACCAGTCGTATTTGCTCAAGAAACGGTTTCTCATATTGTATCCATCGACATGATGTCAGGGAAGGAGGATCGTGAGAATATTTTGCGAGCAAGGGCATCTGGAAAAGGGGTTCTTACATCCCCTTTTAAACTACTAAAGTCCAATTACCTCGGTGTTGTACTTACATTTGCTGTCTATGACTCTAAGCTTCCTCCAGATGCTACACCTGAACAGCGTATTGAAGCTACTGTGGGGTATCTGGGTGCATCCTATGATGTTCCATCACTGGTGGACAAGCTTCTTCACCAGCTTGCCAGCCAGCAAACAATTGCTGTCAATGTGTATGACACAACTAATGCATCTGATCCTATTACGATGTATGGTACCGATGTTCTTGATACTGGTTTACTACACATAAGCGGTCTAGATTTTGGGGATCCGCTACGAAAACATGAGATGCACTGCAGGTTCAAGCATACGCCTCCATTTCCTTGGACAGCATTCTGGGCATCCGTGGGGGTATTTGTAATTACCTTTCTTCTGGGATATATATTTTATGCAGCAATAAATCGAATAGCTAAAGTGGAGGATGACTATTGTCAAATGAGAGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTCGCAAAATCTCAGTTTCTTGCGACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGACCTTGATGACAATCAGATGGATTTTGCCCAAACTGCTCACACGAGTGGTAAAGATCTTATATCGGTCATAAGCGAGGTTCTCTATCAAGCTAAGATCGAGGCAGGCAAACTAGAACTTGAAGCTGTAGCTTTTCATCCACATGCAATTCTAGATGAAGTTCTATCACTTTTCTCTGAAAAGTCCAATGAAAAAGGAATTGAGTTGGCTGTTTATGCATCTAACCAAGTACCTAAAGTTGTCATCGGTGATCCTAAACGCTTCCGACAAATAATTACCAATCTTGTTGGAAATTCACTTAAGTTCATTCACAATAAAGGACATGTTTTTGTCTCGATTCATCTGGCAAATGAAGTGAAGAATCCACTTCACATCATGGATGCAGTGCTGAGAGAATGCTTAAACTTGAATCAGGACATGTCGGGAAGAGTATGCAATACATTGAGTGGATTTCCTGTAGGAAACAGATGGAAAAGCTGGGAAAAGTTTCAAAAGTTAAATTTGGTGCATGAGTCAGAAACTATCCAACTACTGGTAACGGTCGAGGACACTGGTATAGGAATTCCTACCGATGCTCAAAACCGCATATTTACACCTTTTATGCAGGCTGATAGTTCCACATCACGAACATACGGTGGAACTGGAATAGGATTAAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGAAATTGGAAGTACTTTTTCATTTACTGGAAATTTTAGAAAAGGAGAAACAGAATCTGTGGATGAGAAGTGGCAGAAGAATAACCCTTTGGCCTCTGAGTTCCAAGGTTTGAGAGCATTAGTAATAGATAGAAGAAAAATCCGGGCTGAGGTTACACGATATCACCTGCAGAGGTTGGGTATGTCTGTAGATGTAAATTCCAGTCTTCAATCTGCTTGCTTTTCTCTTTCTGATACTTGCAACTCAAGTATGTCAACGCAGTTGGCCATGATTCTTATAGACAAGGATTCTTGGGACAAGCAAAGTAGTATCTTATACGCAATCAAGAAACAAGGACAGAATGGCGTCAAAGGGGACTCGCTAAACTTTCCGAAGATTTTTCTCCTGGCCACCCACCTTAGCCCCAATGAGCGGAAGGAGCTAAAGTCAGTTGGTATCATAGATGATGTACTAATGAAGCCCCTTTGGCAAAGTGTTTTGATTCGCTACTACAGAGAATCCCTTGGAACTGGGAGAAAACAAATAGATAGAAAGAAAGTATCCCAACTTGAAAATTTATTGATACACAAACGAATTTTGGTGATTGATGATAATGCAGTGAACAGAAAAGTTGCAGAAGGTGTTCTGCGAAAATATGGAGCAGTAGTTACCTGTGTGGATGGTGGTAAGGCTGCTCTTAAGGTGCTTAAACCACCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGTTTTGAGGTGACTAGGCGAATCCGGTATATGGAGAACGTGGTAAATGAAAAAATTGCTTGTGGGAAAGAATTGGCAGAGATGTTTGGTAACATTTCTTATTGGCACATACCAATACTAGCTATGACAGCTGATGTAACTCAAGCATCAAATGAAGAATGCAAAAAATGTGGGATGGATGACTTTGTGTCAAAGCCATTTGAAGAAGAGCAACTCTACACGGCAGTGGCACGTGTCTTCAGTTTTTGTTCATAG 3672 0.405 MSVIVNGRVSCSNGRCSSPKIKSWKGNESLHVSNSSTTCRRKLFLLLFWVFGAVVAIGSVWFMFSTFNFKHFIKETACEKSTQTLLQRYNVSRKQLHVLASLFSGSDQILSNCIDERRLQMLLSSDIVNTPQLMCPKNLDLQKEHSYVAESVEQCPILADFVHTRLGLSFPWKAYVTLDSALLSDLVNVLLRGKVMRVCAIVDNVNLSSLIKGCCLVLIGIILSHKLSGFCLLRKNQKQKVVKEHPTAPQKRIQHCMLGHSKATGWRRKKLLVIFMSVGILGSAWLFRYMSSDIAQRGEEMLATMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAVDQKIFGEYTESSAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQECIPENLDPAPIQDEYAPVVFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNYLGVVLTFAVYDSKLPPDATPEQRIEATVGYLGASYDVPSLVDKLLHQLASQQTIAVNVYDTTNASDPITMYGTDVLDTGLLHISGLDFGDPLRKHEMHCRFKHTPPFPWTAFWASVGVFVITFLLGYIFYAAINRIAKVEDDYCQMRELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDDNQMDFAQTAHTSGKDLISVISEVLYQAKIEAGKLELEAVAFHPHAILDEVLSLFSEKSNEKGIELAVYASNQVPKVVIGDPKRFRQIITNLVGNSLKFIHNKGHVFVSIHLANEVKNPLHIMDAVLRECLNLNQDMSGRVCNTLSGFPVGNRWKSWEKFQKLNLVHESETIQLLVTVEDTGIGIPTDAQNRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPEIGSTFSFTGNFRKGETESVDEKWQKNNPLASEFQGLRALVIDRRKIRAEVTRYHLQRLGMSVDVNSSLQSACFSLSDTCNSSMSTQLAMILIDKDSWDKQSSILYAIKKQGQNGVKGDSLNFPKIFLLATHLSPNERKELKSVGIIDDVLMKPLWQSVLIRYYRESLGTGRKQIDRKKVSQLENLLIHKRILVIDDNAVNRKVAEGVLRKYGAVVTCVDGGKAALKVLKPPHNFDACFMDLQMPEMDGFEVTRRIRYMENVVNEKIACGKELAEMFGNISYWHIPILAMTADVTQASNEECKKCGMDDFVSKPFEEEQLYTAVARVFSFCS 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g03035 1223 FunFam Histidine kinase 4 343 570 - -
Mepo7g03035 1223 Gene3D CHASE domain 343 569 IPR042240 -
Mepo7g03035 1223 SMART CHASE_2 339 538 IPR006189 -
Mepo7g03035 1223 CDD HATPase_EvgS-ArcB-TorS-like 741 900 - -
Mepo7g03035 1223 PANTHER TWO-COMPONENT HISTIDINE KINASE 304 1212 - -
Mepo7g03035 1223 SMART HisKA_10 624 689 IPR003661 GO:0000155|GO:0007165
Mepo7g03035 1223 Pfam Response regulator receiver domain 1083 1215 IPR001789 GO:0000160
Mepo7g03035 1223 PRINTS Bacterial sensor protein C-terminal signature 848 858 IPR004358 GO:0016310|GO:0016772
Mepo7g03035 1223 PRINTS Bacterial sensor protein C-terminal signature 830 844 IPR004358 GO:0016310|GO:0016772
Mepo7g03035 1223 PRINTS Bacterial sensor protein C-terminal signature 865 883 IPR004358 GO:0016310|GO:0016772
Mepo7g03035 1223 ProSiteProfiles Histidine kinase domain profile. 631 905 IPR005467 -
Mepo7g03035 1223 Pfam His Kinase A (phospho-acceptor) domain 624 689 IPR003661 GO:0000155|GO:0007165
Mepo7g03035 1223 SUPERFAMILY CheY-like 1081 1219 IPR011006 -
Mepo7g03035 1223 ProSiteProfiles CHASE domain profile. 339 563 IPR006189 -
Mepo7g03035 1223 ProSiteProfiles Response regulatory domain profile. 1082 1219 IPR001789 GO:0000160
Mepo7g03035 1223 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 736 900 IPR003594 -
Mepo7g03035 1223 Pfam CHASE domain 342 536 IPR006189 -
Mepo7g03035 1223 CDD HisKA 624 685 IPR003661 GO:0000155|GO:0007165
Mepo7g03035 1223 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 611 690 IPR036097 GO:0000155|GO:0007165
Mepo7g03035 1223 Gene3D - 688 906 IPR036890 -
Mepo7g03035 1223 CDD REC_hyHK_CKI1_RcsC-like 1083 1215 - -
Mepo7g03035 1223 SMART HKATPase_4 736 905 IPR003594 -
Mepo7g03035 1223 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 679 900 IPR036890 -
Mepo7g03035 1223 Gene3D - 1077 1221 - -
Mepo7g03035 1223 Gene3D - 596 687 - -
Mepo7g03035 1223 SMART REC_2 1081 1215 IPR001789 GO:0000160
Mepo7g03035 1223 FunFam Histidine kinase 4 596 687 - -
Mepo7g03035 1223 Gene3D - 290 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g03035 Mepo-Chr7 41231275 41238012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g03035 46 1222 Miscellaneous Gene Families AT5G35750 58.676 0.0 1325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo7g03035 CHASE 2.1e-33 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g03035 K14489 - gmx:100805107 1818.13