Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02978 ATGAATGATTATGCATACAAAGTTGAAACCATGAATCGTCTTGTCCAATGGAGAATCCACAATTTATCAACATGCACTTATATGAAAGCTGATCCATTCAACATAGCCATGTGGAACTGGCATTTATCAGTGGAAAAGAACTGTGGTTTACGTATTGAATTGTATCCAGAAATGTCTAAAACAATCACACAAAATCCTCCAATTGCATCTTTCATAGTTAGGATTCTTAGTTATGCTGGAAATAGCAAAATCTTGACTCAATCAGAAATAAAAGATAAACTTCTTAGCAATAAGGATAGCTTTGTGTGGGAGATTGGGGTTCCATTACCTGGAAAATTCATAATTGACATTGAGTTTCTGGATTTGAAAACTACATGTCCAAAGGGTGGGGAAGCTTGCTCTATTTGGCCTAGTGGATTTATGCAGCAGAGACAAAATGCAGCAGCCCTTGAATCCCTTGGTCGAATGATAAGAGAAGATATCTATACAGACATAACAATCAACGTCAATTCCGAGGGAAGCATAAGAGCTCATCGCGCTGTTCTTGCTTCACAATCACCTGTGTTTCACAGCATGTTTTCACATAATGTTAAGGAGACTGATTTGTCTACCATAAACATCACAGACATGTCAATTCAATCTTTTCAGACGTTTATAAATTTTCTTTATGGCAATGTCAATGATGAAGAATTTCTTATACATAGATTGGACCTATTACACGCAGCTGACAAGTATGATATCTATGAGTTAAGAGAGGCATGTGAAAAGAGTCTTCAAGAAGATATTGATCCAAAAAATGTACTTGAGAGACTTCAAATTGCATCTTTGTATCAATTAACAGCGTTGAAGTTTAGTTGTATGCAATATCTTGTGAATTTTGGCAAAATATATGATATTCAGGGTGATTTAAGTTCATTCTTGCAAACTGCTGATAGAGATTTGATATGTGAAGTCTTCAAAGAAATTCTTGATGCTTGGAAAAAGTGA 987 0.3536 MNDYAYKVETMNRLVQWRIHNLSTCTYMKADPFNIAMWNWHLSVEKNCGLRIELYPEMSKTITQNPPIASFIVRILSYAGNSKILTQSEIKDKLLSNKDSFVWEIGVPLPGKFIIDIEFLDLKTTCPKGGEACSIWPSGFMQQRQNAAALESLGRMIREDIYTDITINVNSEGSIRAHRAVLASQSPVFHSMFSHNVKETDLSTINITDMSIQSFQTFINFLYGNVNDEEFLIHRLDLLHAADKYDIYELREACEKSLQEDIDPKNVLERLQIASLYQLTALKFSCMQYLVNFGKIYDIQGDLSSFLQTADRDLICEVFKEILDAWKK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02978 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
Mepo7g02978 328 Gene3D Potassium Channel Kv1.1; Chain A 140 291 IPR011333 -
Mepo7g02978 328 Pfam BTB/POZ domain 158 260 IPR000210 GO:0005515
Mepo7g02978 328 SUPERFAMILY POZ domain 148 260 IPR011333 -
Mepo7g02978 328 ProSiteProfiles BTB domain profile. 163 223 IPR000210 GO:0005515
Mepo7g02978 328 CDD BTB_POZ_ZBTB_KLHL-like 162 245 - -
Mepo7g02978 328 SMART BTB_4 163 262 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02978 Mepo-Chr7 40729115 40731032 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mepo7g02978 BTB 1.5e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02978 K10523 - gmx:100790186 444.506