Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02957 ATGAATTCGAGGTGCTTGTTGAACTCTAACAGCATAGTTCAATCTTCTTCAAATTCTGAAACAAGAGAAGAAAGAGTGACTAGTTCTAGAAATAGGCCTCAACATGCCTCGTCGCCTTCGTTTTCGGTTAGGATGGCTATGAGAATATCTAGATCAAGATGGTTTACCTTGTTAAGAAGAGTTTTCCATTATCAAAATGGATCAAGGTCTAACCTTGGCTCTAATCCTTTTAATTCTAGCACATGGTTGATGATGGAGTTTATTGCTTTGATTGTCCAAATAATCATTTCAACTTTCACTTTGGTTATTTCAAAGAGGGAGAAACCTGTTTGGCCTATGAGGATTTGGATATCTGGTTATGATATTGGATGTCTTCTTAATTTGCTTACCGTGTACGGTCGATACCAACAAATTTATCTGATTCAAGGAGATGCTCTAAGCCTTTCTGATATTGAACAGCAGAGAAATAGTGGAGAAACAAGTGTATACAGGATGTCACACTTGATGAACAAATGCAGGACATCACTGGAGTTTTTCTTTGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTCGACTCGCGTTTTGGTTCATTTCAACAAGCTCCAAAACTTCATGTCCTTTGCATCGCCTTGCTTACTTGGAATGCAATCTGCTACTCTTTCCCTTTCCTACTTTTTCTACTGCTATGTTGCTGTGTGCCACTGATTAGTACCCTCCTTGGTTACAACATGAACATAGCCTCTTCTAATAAAGGAGCATCTGATGAACAAATTTCACAACTTCCAAGTTGGAGACATAAAGAACCTCATGCTACCAAGTTAGAGCTTGGCAATGACTCTGAAAGCATTGACAAATTTATCAATGAAGATCCTGAATGTTGCATTTGCTTAGCAAAGTACAAAGATAAAGAAGAAGTTAGACAATTACCATGTTCTCATGTGTTCCACCTAGAATGTGTGGACCAATGGCTAAAAATTATATCATGCTGCCCACTTTGCAAACAAGGATTAGAGAGGTAG 1023 0.3832 MNSRCLLNSNSIVQSSSNSETREERVTSSRNRPQHASSPSFSVRMAMRISRSRWFTLLRRVFHYQNGSRSNLGSNPFNSSTWLMMEFIALIVQIIISTFTLVISKREKPVWPMRIWISGYDIGCLLNLLTVYGRYQQIYLIQGDALSLSDIEQQRNSGETSVYRMSHLMNKCRTSLEFFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCIALLTWNAICYSFPFLLFLLLCCCVPLISTLLGYNMNIASSNKGASDEQISQLPSWRHKEPHATKLELGNDSESIDKFINEDPECCICLAKYKDKEEVRQLPCSHVFHLECVDQWLKIISCCPLCKQGLER 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02957 340 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Mepo7g02957 340 SUPERFAMILY RING/U-box 286 338 - -
Mepo7g02957 340 MobiDBLite consensus disorder prediction 1 22 - -
Mepo7g02957 340 Pfam Ring finger domain 293 335 IPR001841 -
Mepo7g02957 340 SMART ring_2 294 334 IPR001841 -
Mepo7g02957 340 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 12 337 - -
Mepo7g02957 340 MobiDBLite consensus disorder prediction 1 39 - -
Mepo7g02957 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 339 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02957 Mepo-Chr7 40560732 40564342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02957 28 338 C3H Transcription Factor Family AT4G26580 65.916 4.60e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02957 - - gmx:100813670 559.296