Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02935 ATGCGGAGAGGCAGATCGAGACAAAAGAATGGAGTGCAACCAACTAGTCCGAGGGTGCAAGAAGAATTTTCAAGAGCCTTTCCCATTGCGAATGTGCATAGATTGATGAAAAAAGCTCTTCCAAATCATGCAAAGATAACCGATGAAAGCAAGGAAATTATGGTGAAATATGCAGCTGAATTCATTAGCTTTGTTACTGCTGAGGCCAACCATTATTGCAAGTTAGATTGTAGGACAACAGTTACTGCTGAAGATTTGTTAGCTACTATGCACAATTTGGGTTTTGATGTCTATGCTGAGTATTCCCTCCGCTACATCCAACTTTTTCGTCATGGTGCTCGCGTAGGTCAATACGCTCCCCCGCCTCCACCTCCACCTCCACCACCATCACCACCACAGGCTTTTCAAGCTCATGATTTTTCATTGGATCCAAACTTTGTGTTTGCTGACCCAACAGAAATGGGTGCAATTTTAGGAGATGATGATGATGAAAGAGAACTTGGTGGTGGTGGTGGTGGTGGTGATGGCAACTCAAGTGATGGAAGCTTTGATGTTATGGCTTTTCTTAATAGTGATGACTAA 582 0.433 MRRGRSRQKNGVQPTSPRVQEEFSRAFPIANVHRLMKKALPNHAKITDESKEIMVKYAAEFISFVTAEANHYCKLDCRTTVTAEDLLATMHNLGFDVYAEYSLRYIQLFRHGARVGQYAPPPPPPPPPPSPPQAFQAHDFSLDPNFVFADPTEMGAILGDDDDERELGGGGGGGDGNSSDGSFDVMAFLNSDD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02935 193 MobiDBLite consensus disorder prediction 117 134 - -
Mepo7g02935 193 Gene3D Histone, subunit A 17 116 IPR009072 GO:0046982
Mepo7g02935 193 SUPERFAMILY Histone-fold 25 112 IPR009072 GO:0046982
Mepo7g02935 193 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 88 IPR003958 -
Mepo7g02935 193 MobiDBLite consensus disorder prediction 153 193 - -
Mepo7g02935 193 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 14 111 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mepo7g02935 193 MobiDBLite consensus disorder prediction 116 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02935 Mepo-Chr7 40368154 40369613 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02935 4 110 CCAAT-HAP3 Transcription Factor Family AT1G21970 45.872 9.58e-26 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mepo7g02935 CBFD_NFYB_HMF 3.8e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02935 K08065 - mtr:120580699 152.525