Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02929 ATGGCTGATTCAGACAATGAATCCGGAGGAGCACCGAACGCCGGCAACAGTGAGTTATCACCACGTGAACAAGACCGATTCTTACCAATAGCAAACGTGAGCAGAATAATGAAGAAGGCGTTACCGGCGAACGCGAAGATCTCGAAAGATGCTAAGGAAACGGTGCAGGAATGTGTTTCCGAGTTCATCAGCTTCATCACCGGTGAAGCTTCGGATAAGTGTCAGAGAGAGAAACGAAAGACGATCAACGGCGACGATCTACTTTGGGCGATGACTACGTTAGGATTTGAAGAGTACGTTGAACCGTTGAAGATTTATCTTCAACGCTTCAGAGAGATCGAAGGTGAGAAAACCGTTGCTGCACGTGATAAAGATGGTGTTGCTCCTTCTTCTTCTTCGTCTTCGGTTTTTGATTATGGTGCTCCTCCTCAAGTTGGAATGATCATGCATCATCAGCATCAGGGACACGTGTACGGTTCTGGTGGTTATCATCAAGTGCCTGGTGGGCCCGGTTATCCTAATGCTGGATCTAATGCGGGTAGACCCAGGTAG 552 0.4783 MADSDNESGGAPNAGNSELSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQRFREIEGEKTVAARDKDGVAPSSSSSSVFDYGAPPQVGMIMHHQHQGHVYGSGGYHQVPGGPGYPNAGSNAGRPR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02929 183 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 135 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mepo7g02929 183 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 27 91 IPR003958 -
Mepo7g02929 183 ProSitePatterns NF-YB/HAP3 subunit signature. 58 74 IPR003956 GO:0005634|GO:0006355|GO:0043565
Mepo7g02929 183 PRINTS CCAAT-binding transcription factor subunit A signature 93 111 - -
Mepo7g02929 183 PRINTS CCAAT-binding transcription factor subunit A signature 55 73 - -
Mepo7g02929 183 PRINTS CCAAT-binding transcription factor subunit A signature 74 92 - -
Mepo7g02929 183 MobiDBLite consensus disorder prediction 156 183 - -
Mepo7g02929 183 SUPERFAMILY Histone-fold 24 133 IPR009072 GO:0046982
Mepo7g02929 183 Gene3D Histone, subunit A 16 135 IPR009072 GO:0046982
Mepo7g02929 183 FunFam Nuclear transcription factor Y subunit B-3 16 138 - -
Mepo7g02929 183 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02929 Mepo-Chr7 40291912 40293016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02929 1 121 CCAAT-HAP3 Transcription Factor Family AT4G14540 86.777 4.24e-75 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mepo7g02929 CBFD_NFYB_HMF 1.6e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02929 K08065 - gmx:100813580 273.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02929 7 40291912 40293016 Mepo7g02929 7 40291912 40293016 ECH