Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02879 ATGCAAACTTCTGTTAATCACAAAATGTCATATGATTCTAGCATGTTCAGCATCGAGCCTATACAAAATCTAGACTCATATTGCTTCCTGCAAAATGAGAATCTCGAAAACTACTCATCTTCTGATAACGGTAGCCATTCAACCTACCCTTCATTTCAAGCTTTAGAACAAACCCTTGAATCTTCTAACAATAGTCCGGTCTCGAAGCTACAGTCAAAATCTTACACGTTCACGTCACAAAACTCTCTTGAAATCATCAATGATTCTTTAGAGAACGAATCTTGCTTGACACATAACCAAGATGACTTGTGGCACAAGATAAGAGAGCTTGAAAATGCTATGCTAGGACAAGATGCTGCAGATATGCTAGACATATATAATGATACTGTAATAATTCAACAAGAATCTGATCCACTTTTGGTAGAGGCGGAAAAGTGGAACAAAATGATTGAGATGATATCTAAAGGGGATTTGAAAGAAATTCTTTTTACTTGTGCAAAAGCAATATCAGAAAATGATATGGAAACAGCTGAATGGTTAATGTCAGAATTGTCGAAAATGGTTTCGGTTTCGGGAAATCCAATCCAAAGGTTAGGAGCATACATGTTGGAAGCTCTTGTTGCAAGAATTGCTTCTTCAGGAAGCATAATATACAAATCCTTGAAATGCAAAGAGCCTATAACTGCTACTAGTAAAGAACTACTCTCACACATGCATGTGCTTTATGAAATTTGTCCTTACCTCAAATTTGGATATATGTCAGCAAATGGTGTAATTGCTGAAGCCTTGAAAGATGAAAGTGAAATTCATATAATTGATTTTCAAATTAATCAGGGAATTCAGTGGATGAGTCTAATCCAAGCACTTGCTGGAAAACCTGGAGGACCGCCGAAGATCAGAATAACCGGTTTTGATGACTCAACTTCAGCTCATGCTAGGGGAGGAGGACTTGGTATTGTTGGAGAAAGGTTGTCAAAACTTGCGCAGTCATATAATGTAGCATTTGAGTTTCATGCTATTGGGGCTAGTCCTTCTGAGGTGAGACTTGAAGACCTTGAACTTCGTCGCGGTGAAGCTATTGCGGTGAATTTTGCCATGATGCTGCACCATGTACCGGATGAAAACGTACATGATGGTAAGAATCATCGCGATCGATTGGTGAGATTGGCAAAATGTTTGTCTCCTAAGGTAGTGACTCTTGTTGAGCAAGAATCAAATACCAACGAGCTTCCGTTCTTTGCACGTTTTGTCGAGACAATGAACTACTACTTCGCAGTTTTTGAATCAATTGATGTTGCTTTGCCAAGGGAGCACAGAGAAAGGATTAATGTAGAACAGCATTGCTTGGCTCGCGAAGTGGTCAATTTAGTAGCATGTGAAGGCGCAGAAAGAGTTGAACGTCACGAGGTTCTGAAGAAGTGGAGATCATGTTTCACAACGGCTGGATTCGTACCATATCCATTAAGCTCTTATATTAATTGTTCAATACAAAATCTTCTAGAAAATTACCAAGGACATTATACTCTACAAGAGAAAGATGGTGCTCTTTATCTTGGTTGGATGAATCAACCTCTTATTACCTCTAGTGCTTGGAGGTGA 1599 0.3896 MQTSVNHKMSYDSSMFSIEPIQNLDSYCFLQNENLENYSSSDNGSHSTYPSFQALEQTLESSNNSPVSKLQSKSYTFTSQNSLEIINDSLENESCLTHNQDDLWHKIRELENAMLGQDAADMLDIYNDTVIIQQESDPLLVEAEKWNKMIEMISKGDLKEILFTCAKAISENDMETAEWLMSELSKMVSVSGNPIQRLGAYMLEALVARIASSGSIIYKSLKCKEPITATSKELLSHMHVLYEICPYLKFGYMSANGVIAEALKDESEIHIIDFQINQGIQWMSLIQALAGKPGGPPKIRITGFDDSTSAHARGGGLGIVGERLSKLAQSYNVAFEFHAIGASPSEVRLEDLELRRGEAIAVNFAMMLHHVPDENVHDGKNHRDRLVRLAKCLSPKVVTLVEQESNTNELPFFARFVETMNYYFAVFESIDVALPREHRERINVEQHCLAREVVNLVACEGAERVERHEVLKKWRSCFTTAGFVPYPLSSYINCSIQNLLENYQGHYTLQEKDGALYLGWMNQPLITSSAWR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02879 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 94 526 IPR005202 -
Mepo7g02879 532 Pfam GRAS domain family 159 532 IPR005202 -
Mepo7g02879 532 ProSiteProfiles GRAS family profile. 149 532 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02879 Mepo-Chr7 39749142 39752199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02879 1 532 GRAS Transcription Factor Family AT1G50600 55.064 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo7g02879 GRAS 3.8e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02879 - - cam:101502619 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo7g02879 7 39749142 39752199 Mepo7g02879 7 39749142 39752199 ECH
Mepo3g04725 3 58814418 58817829 Mepo7g02879 7 39749142 39752199 PCT