Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02852 ATGACATCTTACTGCAGAGAACAACGCTTTGTTGAGATGAAAAGGAAATCCACGACATTAAGGGATGAAACTGAATCTGAAATCGAGTTTCAATCTCTGTTTGTAACGAATTATCATCTTGAAGACAACGATGGCGAACCCGTGTGTTTTTCTGTTTTACCGTTTAAATGGAGCGCTTCTAAGGCTTCCAAAGTTGATGATACCAAGAAGGGGTTGAAGATATTTTTGCATGGATCTGCTGATAATGGGTTGCAGACGATTTTCATGGAAGTTACTGCATGGAAGTTTGATCTAACTGGTATGAAACCCGAGGTATCTTTGTTGTCGAAGGATAAAAGATGGATCAAGCTTCAGAAACCGAGGAAAAGCTTTCAGAAAACTGTGAAAACTGCTTTGACTACGCTTTATTTTCTTCGTTGTGCTAAGAAAAATCCTCGAATATCTGTTGATTCTTTTTGGAGTAATATGTGCAAGGATAAGGATTTGAGCTCTTATGGGTTTAAGCCTTCACAAAAGGATTTATTGGATCATATGTCTCTGATTGGTGAAGCTACTACAAGAGATATTGGCTTAGCTAATTCTAAGCTTTTGCTCTCAGTTTTAGGGGACAAGTCCGGGGATCAGAAACCATATGATGAGGAATTTGATACTAACAATGATATCATAGAAGAATCTGATGAAGACTCAGAAGTAGAGGATGATTTGTTTGATTCTTTTTGTGCATTGTGCGACAATGGCGGTAATCTCATTATGTGTGATGGAGCATGCATGAGGTCATTTCATGCTACTAAGGCAGATGGTAGGGAATCTTTATGTGATTCTCTTGGTTTTACCAAGAAGGAAGTTGATGATATTGAGACGTTTTATTGTAAGAATTGTGAATATCGTCAGCATCAATGCTTTGCATGTGGCGAGCTGGGTTCTTCTGATAAAGATAAGAATGCTGAGGTCTTTAAATGTGCTTCTGAAACCTGTGACCGTTTCTATCATCCACATTGCATTGCCCCATTAGTTAAGCATGTTTCCAAGGATCTTGAGAAAAATAATGCTGATGGGCAGACATTTTCTTGTCCAATTCATTTTTGCTGCGTCTGTGAAGGCTTGGAAAATAAGATGGACCCTGAGTTGCAATTTGCAGTTTGTAACCGTTGCCCAAAGTCATATCATCGCAAATGTTTGCCTACAGAGATTGCTTTTGATGACATTGATGATGTTGCAACAAGGGCTTGGGAAGGTCTTTTGCCAAACAATCGTATCCTTATATATTGCTTAAATCATGAGATCAGTGATGAGCTTGGGACTCCTGTAAGAGATCATATAAAATTCCCCGACACTAGAGCTAGTGTTCGGGACATCAATACTCCTAATAAGAAGATGAAGCCTACAACTACAGAGGGGGTTAAAATGAAGAGCAATGTTGACTGTGTTAAATCATCTGACAAGAGCACTATAGAAGGATCTAAAGTGACTGGAAAACTGCCTTCTAGTAAAATTGGCAGCAAAAAGTCCTCTGGAGAGACCAGTGATAAGCTTGAGACTCCTGTAAGAGATCATATAAAATTCCCCGACACTAGAGCCACTGTTCCGGAAATCAATACTTCTAATAAGAGGATGAGTCCTACAACTACAGAGAGCGTTGAATTGAAGAAAAATGTTGGCTCTGTTAAATCATCTGGCAAGAGCATTGCAGAAGGATCTAAAGTGACTGGAAAACTGCCTTCTAGTAAAATTGGCAGCAAAAAGTCCTCTGAAGAGGCCAGTGATAAGCTTGAGACTCCTGTGAGAGATCATATAAAATTTCCCGACACTAGAGCCACTGTTCCGGAAATCAATACTTCTAATAAGAGGAAGAGGCCTACAACTACAGAGAGCGTTGAATTGAAGAACAATGTTGGCTCTGTTAAATCATCTGGCAAGAGCATTGCAGAAGGATCTAAAGTGACTGGAAAACTGCCTTCTAGCAAAATTGGCAGCAAAAAGTCCTTTGAAGAGGCCAGTGATAAGCTTGAGACTCCTGTAAGAGATCATATAAAATTCCCCGACACTAGAGCCACTGTTCCGGAAATCAATACTTCTAATAAGAGGATGAGGCCTACAACTACAGAGAGAGTTGAATTGAAGAACAATGTTGGCTCTGTTAAATCATCTGGCAAGAGCACTGCAGAAGGATCTAAAGTGACTGGAAAACTGCCTTCTAGTAAAATTGGCAGCAAAAAGTCCTCTGAAGAGGCCAGTGATAAGCTTGAGACTCCTGTAAGAGATCATATAAAATTCCCCGACACTAGAGCTACTGTTCTGGAAATCAATACTTCTAATAAGAGGATGATGGCTACATCTACAGAGAGAGTTGAATTGAAGAACAATGTTGGCTTTGTTAAATCATCTGGCAAGAGCACTGTACATAGATCTAAAGTGACCGGAAAACTGTCTTCTGAAACTGGTAGCAAAAAGTCTACTGAAAAGATCGTATCTGGTTCAGATATTTCAAGGACAGCGGAATCAAAGGAAATGTCAAGTAAGTGTGTGACTGAATACAAGTCAACCTCAAAGAATTCGTCTGAAAAGGCGATTTCTTGTTCAGATATTTCAAGGAACCTGGAATCAAATAAAATAAGTTTGACTGAAGAAAACAAGAAGTCAAATTCAAATTTGTCTGGGAAGGTGATTTCTGGTTCACATATATCAAGTAAACCAAAATCAAATGAAAGATCTGAAACGGTTTTGACTAAAAACAAGAAGCCAATGCCCAAGTGTGAGGTAAAAAAGCACCCAACTGGTCAGAAATTGTGTGCTTCTATGAATAAAGGTTCTGACCAAATAAAGCACGACAATCAGGTCGATGATGCAGATAATCGGACCCTGTCGATCATGCCTGTTAGAAGTGTATTGCCTCCACTGGATGCTGATTCAGAGAAGGGTTTTGTGGATTCGTTTAAAGAAGCTAGATCCTCAATATTGTTGGAGGGTGTGATAAAAAAGCATAAGTTGGGAGATGTTGAGGATAAGGCCATTACAATGAGGAAGCTGGATGACTCAGTTGACTTGACTACTAAACAGAAGGTAGTAGCCCAGGAGCATGCTCACATGTACAGTGACAAGTTGGCTGCTAAAAATATTATGGAGAGTAAGCTGGATGACTCAGTTGACTTGACTACTAAACAAAAAGTTATAGCCCAGGAGCATGGTCACATGTACGGTGACAAGTTGGCTGCTGAAAATATTATGGATGGTGATTCTGGGGACAAGCTCATGCCGAATCATGATCTCTTAAAGTCAACTGATGATCAAGAACTAGCACCTGTAAATGAAAGTAAGAAAAAAAGTTCACATGATGGTAATGCTGATGATCAAGAACCAGCACCTGTAAATGAAAGTAAGAAAAAAAGCTCACATGATGGTAACGCTGACCAGGAGAGTCAAGACAAACAGGAATTTAAGACAAGCAAGTCTTCGAAGACATCTGGGAAGAGAAAAGGAATTGATGAAAATGATAGAAAGGCAATTGAAAAGGATGGTCGCGATTCTTCTCATGTCAACAAGCATTCAGCTCGTTTTGCAGCTGCTCGTAAATCAAAATTTGGAACTGGTCTAAATGTAAAATTTGCACCCATCCATTCAGGTGGTTGGCTGGAAGAGTAG 3639 0.3963 MTSYCREQRFVEMKRKSTTLRDETESEIEFQSLFVTNYHLEDNDGEPVCFSVLPFKWSASKASKVDDTKKGLKIFLHGSADNGLQTIFMEVTAWKFDLTGMKPEVSLLSKDKRWIKLQKPRKSFQKTVKTALTTLYFLRCAKKNPRISVDSFWSNMCKDKDLSSYGFKPSQKDLLDHMSLIGEATTRDIGLANSKLLLSVLGDKSGDQKPYDEEFDTNNDIIEESDEDSEVEDDLFDSFCALCDNGGNLIMCDGACMRSFHATKADGRESLCDSLGFTKKEVDDIETFYCKNCEYRQHQCFACGELGSSDKDKNAEVFKCASETCDRFYHPHCIAPLVKHVSKDLEKNNADGQTFSCPIHFCCVCEGLENKMDPELQFAVCNRCPKSYHRKCLPTEIAFDDIDDVATRAWEGLLPNNRILIYCLNHEISDELGTPVRDHIKFPDTRASVRDINTPNKKMKPTTTEGVKMKSNVDCVKSSDKSTIEGSKVTGKLPSSKIGSKKSSGETSDKLETPVRDHIKFPDTRATVPEINTSNKRMSPTTTESVELKKNVGSVKSSGKSIAEGSKVTGKLPSSKIGSKKSSEEASDKLETPVRDHIKFPDTRATVPEINTSNKRKRPTTTESVELKNNVGSVKSSGKSIAEGSKVTGKLPSSKIGSKKSFEEASDKLETPVRDHIKFPDTRATVPEINTSNKRMRPTTTERVELKNNVGSVKSSGKSTAEGSKVTGKLPSSKIGSKKSSEEASDKLETPVRDHIKFPDTRATVLEINTSNKRMMATSTERVELKNNVGFVKSSGKSTVHRSKVTGKLSSETGSKKSTEKIVSGSDISRTAESKEMSSKCVTEYKSTSKNSSEKAISCSDISRNLESNKISLTEENKKSNSNLSGKVISGSHISSKPKSNERSETVLTKNKKPMPKCEVKKHPTGQKLCASMNKGSDQIKHDNQVDDADNRTLSIMPVRSVLPPLDADSEKGFVDSFKEARSSILLEGVIKKHKLGDVEDKAITMRKLDDSVDLTTKQKVVAQEHAHMYSDKLAAKNIMESKLDDSVDLTTKQKVIAQEHGHMYGDKLAAENIMDGDSGDKLMPNHDLLKSTDDQELAPVNESKKKSSHDGNADDQEPAPVNESKKKSSHDGNADQESQDKQEFKTSKSSKTSGKRKGIDENDRKAIEKDGRDSSHVNKHSARFAAARKSKFGTGLNVKFAPIHSGGWLEE 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 606 643 - -
Mepo7g02852 1212 CDD PHD_SF 361 393 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 477 502 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 581 603 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 685 738 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 660 682 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 503 524 - -
Mepo7g02852 1212 Pfam Cytosine specific DNA methyltransferase replication foci domain 35 132 IPR022702 -
Mepo7g02852 1212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 296 IPR013083 -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 1120 1180 - -
Mepo7g02852 1212 SMART PHD_3 362 427 IPR001965 -
Mepo7g02852 1212 SMART PHD_3 299 361 IPR001965 -
Mepo7g02852 1212 SMART PHD_3 239 294 IPR001965 -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 1076 1183 - -
Mepo7g02852 1212 CDD PHD2_NSD 299 360 - -
Mepo7g02852 1212 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 31 497 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 873 907 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 873 897 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 477 752 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 1081 1114 - -
Mepo7g02852 1212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 297 383 IPR013083 -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 527 564 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 796 832 - -
Mepo7g02852 1212 MobiDBLite consensus disorder prediction 796 837 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02852 Mepo-Chr7 39448965 39459699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02852 237 334 PHD Transcription Factor Family AT5G58610 35.354 2.83e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02852 - - mtr:11425879 2092