Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02788 ATGATTTATGGTAGGTGTGCTGCTTGCAAGAGTCAAAGAAGAAGGTGCCCTTCTGATTGCATTTTCTCTCCATATTTTCCAGCCAATAATCCTCAAAGATTTGCTTCTGTCCACCGAATCTATGGTGGTGGCAATGTTGGAAAAATGCTTCAGCAATTGCCTCACTATGTACGAGAACAAGCTGCAAATACTTTGTATTTAGAAGCACAATGTAGGATTCAAAATCCTGTTTATGGATGTGTTGGGATTATCTCTAAATTGTATCAACAAATCCATGATACAGAAGCTGAGCTGGCCAAAATTCAAACTCAGATTGCTTGTCATAAGCTTCAAAATCAACAATTTGAAGCTGGATCAAACTTCAACCTTTTGCCTCCACAAAGTAGCAGCATGGAGCAGTTTCAATGGCCTAATCAAACTCCTAATTGGTTCAATTAA 438 0.3858 MIYGRCAACKSQRRRCPSDCIFSPYFPANNPQRFASVHRIYGGGNVGKMLQQLPHYVREQAANTLYLEAQCRIQNPVYGCVGIISKLYQQIHDTEAELAKIQTQIACHKLQNQQFEAGSNFNLLPPQSSSMEQFQWPNQTPNWFN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02788 145 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Mepo7g02788 145 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Mepo7g02788 145 Coils Coil 84 111 - -
Mepo7g02788 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02788 Mepo-Chr7 38882718 38884914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02788 5 106 AS2 family AT3G26660 65.686 2.83e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo7g02788 LOB 2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02788 - - gmx:100790640 228.409