Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02773 ATGACTATTACCATCACTTCACTAACTATGAGCAAATGGTTTTCTAGAACAATAAAAGCAATAACAAAGTGTCAACAAGTTCTTTTTAATTGTTCTGCATTTGAGAAATTCATGAAAGCCATGGAGAGATTTCTTTTTGCTGCATTCACATGCATTTTAGCACTAGGAGGGTCAATAATAGGAACAATAGCAGGAGCTATCAAAGGCCAGACCACAGAAACTGGTTTTCTTGATGGAGCTGGAAAAGGAGCAATTGCAGGAGCCATTGCAGCCATAGAACTAATGAGTTTTGCTTCTGTTGCTGAGCCATTTTCCAAGGTTGCATTGTTGAGAAGTTTACTAAATGGGAAAGTGTTTATGGAATGGATATGTCCAACTGTTGCACAAGCTTATATGTTTTATATAAATTCACTAGAAACAGCTTATGGAGGAGTACTTTCAGATATTTATGACGACTTGGGAGTTAAGGGGATGCCACAAAGTTGTATTATGAAGCTTCCATGTCAGCAATTCAGCTCCAACAAAATGATGAAATTATACAATGAATCATGTTGCTCAATTTGCATCCAGGATTTTGAGAACGAAGAATTGGTCAGAATACTTCCAAAGTGTTGCCACATTTTTCATTTAGAGTGCATTGACAAGTGGCTAGTCCAACAAGGATCATGTCCTATTTGTAGAACTTACGTTCCTAACCATATTAATCCGTGA 711 0.3713 MTITITSLTMSKWFSRTIKAITKCQQVLFNCSAFEKFMKAMERFLFAAFTCILALGGSIIGTIAGAIKGQTTETGFLDGAGKGAIAGAIAAIELMSFASVAEPFSKVALLRSLLNGKVFMEWICPTVAQAYMFYINSLETAYGGVLSDIYDDLGVKGMPQSCIMKLPCQQFSSNKMMKLYNESCCSICIQDFENEELVRILPKCCHIFHLECIDKWLVQQGSCPICRTYVPNHINP 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02773 236 SMART ring_2 185 226 IPR001841 -
Mepo7g02773 236 SUPERFAMILY RING/U-box 178 233 - -
Mepo7g02773 236 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 34 228 IPR044523 -
Mepo7g02773 236 ProSiteProfiles Zinc finger RING-type profile. 185 227 IPR001841 -
Mepo7g02773 236 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 233 IPR013083 -
Mepo7g02773 236 Pfam Ring finger domain 185 227 IPR001841 -
Mepo7g02773 236 CDD RING-H2_EL5-like 184 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02773 Mepo-Chr7 38782262 38783980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02773 32 230 C3H Transcription Factor Family AT5G66070 33.493 1.35e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02773 - K19041 mtr:11435458 364.385