Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo7g02770 | ATGGAAGGTGTTGTTGTGAGAAGGGTCATTCCTTCTGATAATAGTTGTCTTTTTAATGCAGTTGGATATGTTATGGATCGTGACCAAACTAAAGCTGCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCTGAGAAATATTCTGAAGCATTTCTTGGGAAGCCAAATTCAGCGTATTGTAACTGGATTCTTGACCCAGAGAAGTGGGGAGGTGCAATTGAACTCTCAATATTAGCAGATTATTATGGACGTGAAATCGCAGCCTATGATATCCAGACAACACGATGCGATTTGTACGGCCAGGAAGGTAATTATTCTGAAAGGGTGATGCTGATTTATGATGGTCTCCACTACGATGCTTTAGCTATGTCTCCTGTTGAAGGAGCTCCCGAGGATTTTGACCAGACCATCTTTGCCATACAAAAGACCAGAAGCATTGGACCTGTTGAGGGGCTTGCTTTAAATTTTATTAAAGACCAACATAGGAAACGGAGATTCACCGACACTGCCAACTTCACTCTACGATGTGGGGTATGCCAAATTGGAGTCATTGGTCAGAAGGAGGCAGCAGAGCACGCTCAAGCAACTGGTCATGTAAACTTTCAAGAATATAAATGA | 627 | 0.4258 | MEGVVVRRVIPSDNSCLFNAVGYVMDRDQTKAAELRQVIAATVASDPEKYSEAFLGKPNSAYCNWILDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEGNYSERVMLIYDGLHYDALAMSPVEGAPEDFDQTIFAIQKTRSIGPVEGLALNFIKDQHRKRRFTDTANFTLRCGVCQIGVIGQKEAAEHAQATGHVNFQEYK | 208 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo7g02770 | 208 | FunFam | ubiquitin thioesterase OTU1 | 1 | 173 | - | - | |
| Mepo7g02770 | 208 | Pfam | OTU-like cysteine protease | 12 | 107 | IPR003323 | - | |
| Mepo7g02770 | 208 | PANTHER | HIV-INDUCED PROTEIN-7-LIKE PROTEASE | 5 | 206 | - | - | |
| Mepo7g02770 | 208 | SUPERFAMILY | Cysteine proteinases | 8 | 124 | IPR038765 | - | |
| Mepo7g02770 | 208 | ProSiteProfiles | OTU domain profile. | 5 | 127 | IPR003323 | - | |
| Mepo7g02770 | 208 | Coils | Coil | 204 | 208 | - | - | |
| Mepo7g02770 | 208 | CDD | OTU_plant_OTU1_2-like | 3 | 166 | - | - | |
| Mepo7g02770 | 208 | Gene3D | - | 1 | 173 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo7g02770 | 1 | 208 | C2H2 Transcription Factor Family | AT1G50670 | 81.731 | 1.84e-131 | 366 |