Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02762 ATGAGAAGACCTAGATTAAAATCAAAGCAATTTCGCAAACAACAACGCGTCTCAGAACTAGACAAAGAACTAGAAAAAATCAACCTCTTGAATTCATGGATTCAATCTCAAAAACCAGACTCCGGTTCAAACCCAATGTCTCTTCCACCTCTCCCCAGAAACTCCCCCGTTGGCCGCCTTGCTGACGGCACTTTCTCTCGCTACGCCGGCGTGGTACGGTTTGACCAGTTACCGATATCGAAGAAAACCATAGACGCATTGATATCCAAGAAAACCCAAAAAGAATTGCATACGAAATTCGTTTCCATGACTGACATTCAACGAGCTTCTCTTCCTCATGCGCTTTGTGGTCGTGATGTTCTTGGTGCTGCCAAAACTGGTTCTGGAAAAACACTTGCTTTCATTATTCCTGTGTTGGAGAAATTGTATAGAGAGAGATGGGGATCGGAAGATGGGGTTGGGAGCATAATCATATCCCCTACAAGAGAATTAGCTAGTCAGATTTTTGGTGTGTTGAAAGCTATTGGGGAGCACCATGGTTTTAGTGCTGGCCTACTCATTGGTGGTCGTAGGGATGTTGCCGCAGAGAAAGAATGTGTCAACAAGCTAAACGTATTGATCTGCACACCCGGTCGCCTTCTACAACACATGGATGAAACTCCCAATTTTGATTGTTCACAGATGCAGGTTTTGGTACTAGATGAGGCTGATCGTATTCTTGATAGTGGATTCAAGAAGGAAGTAAACGCAATCATCTCACAATTACCAAAGCACAGACAAACCATGCTTTTCTCGGCAACTCAAACAAAGTCGGTTCAAGATCTTGCAAGACTAAGTTTGAAGGACCCAGAGTATATAAGTGTGCACGAAGAGTCTGTGGCTGCAACTCCTACTCTTTTGATGCAAACGGTGATGATTGTTCCACTGGATCAAAAGTTAGATATGCTATGGACTTTCATAAAGAAACATCTACAGTCAAAAACACTTGTCTTTCTATCAAGCTGTAAACAGGTAAAATTTGTGTTTGAGGCATTTAAGAAACTTCACCCTGGCATACCGTTGAAGTGCCTTCATGGGAGGATGAAACAGGAAAAAAGAATGGGAATATATTCTGAGTTCTGTGAGGAGAAGCGCTCAGTTCTTTTCTCAACTGATGTGGCTGCAAGAGGCCTTGATTTTAATAAGGCAGTCGACTGGGTTGTTCAGGTAGATTGCCCCGAGAATGTAGCATCTTACATACATCGAGTTGGCCGTACTGCTCGTTATAAATCTGATGGAAAGTCAGTTTTATTTCTATTGCCTTCAGAAACTATGATGCTTGAAAAGTTAAAAGCAGCAAAGGTTCCAGTTCATCGTCCGAAGCCAATGAAAGAACTGCTGCAACTGCTGCAACCGGTGTCCAGTTTGCTTGCATCTTTACTGGTCAAGTACCCAGAACTTCAGCAGCGGGCCCAAAGGGCATTTGTCACATACTTGAGATCCATCCACCTCCAAAAAGATAAAGAGATCTTTGACGTTTTGAAACTTCCTATTGATGAGTATTCAGCATCATTAGGTCTGCCAATGACCCCCAAAATCCGTTTTCTAAACCAGAAAATTAAATCTAAATCTGTGGCAACAAAATCATATTTAGTTGAACCTGAGGTTCCAAAAAAGGAAAATGTATTGGGAGGTTCAAGAGAAAAGATAGACACAATTGTTTTCAAAGACGAGGAATTTGAAAATGATCTTCTTCATGTGGCTGATACCTCAAATGAAGGCGACGTGAAGTCAGCTGAAATTGGAGAGTTAATGCCAGCAACTCGTTTATTAAAGAAAAAAAAACTCAAGATTAACACGCATAGACCACTGGGGAGTCGGGTTGTATTCGACGATGAAGGCAACACACTTCCTCCACTAGCCAGGATTGCTGACCCACAAAGTGGCAATGGAACATTGATTGATCCGGAACAAAAAGCTGAATACTATAAAAGGATGCGAGAGGATTTGAAGAAGGCAGACAAGGAAGATAAACTTGTGGAGCGTCAGCGACTTAGAGATAAAAAATTTAAGCAGAAAATGAAATGGAAGGCTGGTAATGAGGAAGAAGAGGACAACCAAGATGATACCTCTGGGTCAGAAGGAGACGAAACGGTAAATAGACGTCATAGAAAGAGTAAAATATACTTTGATAGTGACAGTGATGAGGGTGAAAGAAAAGAAGCTTCAAGAAAACAAACGGAAGATCAAGAAGAGTTGGCTTTGAAGTTGTTACAATCCATGCACTGA 2268 0.4171 MRRPRLKSKQFRKQQRVSELDKELEKINLLNSWIQSQKPDSGSNPMSLPPLPRNSPVGRLADGTFSRYAGVVRFDQLPISKKTIDALISKKTQKELHTKFVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLYRERWGSEDGVGSIIISPTRELASQIFGVLKAIGEHHGFSAGLLIGGRRDVAAEKECVNKLNVLICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKEVNAIISQLPKHRQTMLFSATQTKSVQDLARLSLKDPEYISVHEESVAATPTLLMQTVMIVPLDQKLDMLWTFIKKHLQSKTLVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQEKRMGIYSEFCEEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSETMMLEKLKAAKVPVHRPKPMKELLQLLQPVSSLLASLLVKYPELQQRAQRAFVTYLRSIHLQKDKEIFDVLKLPIDEYSASLGLPMTPKIRFLNQKIKSKSVATKSYLVEPEVPKKENVLGGSREKIDTIVFKDEEFENDLLHVADTSNEGDVKSAEIGELMPATRLLKKKKLKINTHRPLGSRVVFDDEGNTLPPLARIADPQSGNGTLIDPEQKAEYYKRMREDLKKADKEDKLVERQRLRDKKFKQKMKWKAGNEEEEDNQDDTSGSEGDETVNRRHRKSKIYFDSDSDEGERKEASRKQTEDQEELALKLLQSMH 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02762 755 Coils Coil 656 676 - -
Mepo7g02762 755 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 232 240 IPR000629 -
Mepo7g02762 755 SMART DUF4217_3 465 528 IPR025313 -
Mepo7g02762 755 Pfam DEAD/DEAH box helicase 104 275 IPR011545 GO:0003676|GO:0005524
Mepo7g02762 755 PANTHER RNA HELICASE 72 605 - -
Mepo7g02762 755 MobiDBLite consensus disorder prediction 632 651 - -
Mepo7g02762 755 Pfam Helicase conserved C-terminal domain 312 422 IPR001650 -
Mepo7g02762 755 Gene3D - 64 292 IPR027417 -
Mepo7g02762 755 MobiDBLite consensus disorder prediction 682 755 - -
Mepo7g02762 755 CDD DEADc_DDX10 92 289 - -
Mepo7g02762 755 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 111 286 IPR014001 -
Mepo7g02762 755 SMART helicmild6 339 423 IPR001650 -
Mepo7g02762 755 MobiDBLite consensus disorder prediction 35 54 - -
Mepo7g02762 755 Gene3D - 299 544 IPR027417 -
Mepo7g02762 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 442 IPR027417 -
Mepo7g02762 755 MobiDBLite consensus disorder prediction 707 745 - -
Mepo7g02762 755 Pfam Domain of unknown function (DUF4217) 469 526 IPR025313 -
Mepo7g02762 755 CDD SF2_C_DEAD 300 432 - -
Mepo7g02762 755 SMART ultradead3 99 303 IPR014001 -
Mepo7g02762 755 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 312 464 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02762 Mepo-Chr7 38691751 38697360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02762 107 444 Eukaryotic Initiation Factors Gene Family AT3G19760 29.499 2.61e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02762 K14776 - gmx:100792106 1184.09