Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02622 ATGTCTTCATCATCATCGACCGATACTAAAAAAGGAAAATGGTCAAAAGAAGAAGATGAAATATTAAAAGCATATGTGGAAAACCATGGAACCAGAAATTGGAACGAGGTATCAAAAAATGCGGGGCTTATACGTTGCGGTAAAAGTTGTCGTCTAAGATGGTATAATCACCTACAACCAGATGTGAAAAAAGGTCCATTTAGTGAAGAAGAAAAAACAAAAGTTTTTGAGTTCTATAAAAAGTATGGTGAATTCAAATGGTCTAAGCTGGCTCAGGAGTTACCGGGAAGAAGCGATAATGACATCAAGAACTTTTGGAATGCGAGAAAAAGAAAACTTGAAAAGCGTGGCTTGTCACCCTTCCCTGACAAGATGGAACCGGATGATGAGTTGAATAGTAGCCAACAAGTTGAGGATTCACAAGAAGATGAATTTAATATACCACAATTGAAATTTAGAAAATATCCATCAATTTTTGATGAGATAAATGAAAAACTTTTAGATGTCCCAAACATGTTCTACAATAATGTGGGAAGTACTTCAACATTGATTGATAGGGGTAGCATTATTGGAACTTCTCATATACCTATGGCTCCACCCCCACCATGTTCATACCTTCCACTTCCTTCACCTATGATGCTTGGTGACTATCCTCAAATTCCACCACCTATGGAGACTCAGTATCATGGTGACGATGCTAGGCGTGTGCATTTGTCTGAGACAAATTTCGTTGATGAAAAAGGGAAGAAGCCAATGTCGTTGGAGGACTTTATGGATCCAGATGTTGAAGCAAACCTTGATGAATTCATGGATCCGTGTCTTTTGATTGACTTCAGTTTATTTGACAAGGATGATAACAGTAACTTGCATGACAAGATATAA 882 0.3764 MSSSSSTDTKKGKWSKEEDEILKAYVENHGTRNWNEVSKNAGLIRCGKSCRLRWYNHLQPDVKKGPFSEEEKTKVFEFYKKYGEFKWSKLAQELPGRSDNDIKNFWNARKRKLEKRGLSPFPDKMEPDDELNSSQQVEDSQEDEFNIPQLKFRKYPSIFDEINEKLLDVPNMFYNNVGSTSTLIDRGSIIGTSHIPMAPPPPCSYLPLPSPMMLGDYPQIPPPMETQYHGDDARRVHLSETNFVDEKGKKPMSLEDFMDPDVEANLDEFMDPCLLIDFSLFDKDDNSNLHDKI 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02622 293 CDD SANT 66 107 IPR001005 -
Mepo7g02622 293 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 6 144 - -
Mepo7g02622 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 114 IPR017930 -
Mepo7g02622 293 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 62 IPR017930 -
Mepo7g02622 293 MobiDBLite consensus disorder prediction 117 131 - -
Mepo7g02622 293 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Mepo7g02622 293 SMART sant 10 60 IPR001005 -
Mepo7g02622 293 SMART sant 63 112 IPR001005 -
Mepo7g02622 293 MobiDBLite consensus disorder prediction 117 143 - -
Mepo7g02622 293 FunFam MYB-related transcription factor 10 63 - -
Mepo7g02622 293 SUPERFAMILY Homeodomain-like 9 106 IPR009057 -
Mepo7g02622 293 Gene3D - 10 62 - -
Mepo7g02622 293 Gene3D - 63 115 - -
Mepo7g02622 293 ProSiteProfiles Myb-like domain profile. 59 110 IPR001005 -
Mepo7g02622 293 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Mepo7g02622 293 Pfam Myb-like DNA-binding domain 64 107 IPR001005 -
Mepo7g02622 293 CDD SANT 13 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02622 Mepo-Chr7 37473329 37474438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02622 11 156 MYB Transcription Factor Family AT2G26960 45.570 2.31e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo7g02622 Myb_DNA-binding 9.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02622 K09422 - mtr:11423382 468.388