Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02618 ATGTCAAGTGGAGCAACACACTGGTGTTATGAATGCAGTCGGCCAATTGTGCTTGAAGGGAGAGACGTCGTTTGCCCTTACTGTGATGAGGGATTTGTACAAGAAATTAACGAGATGCGAGGCACTGCACCTCAAAATACATTTCCATCACGCTCGGGAGAGTTTAATCAAATGCCTGACTTATTTGATGCTATACATGCTTTTGTGGGGCACAGAGGTTCTGACAATAGGTTTGGGCTTATGGATGCTGTTGATAATTTCATGAGGCATAGAATGGCTGGAATGCACCCAAACTTTGATGTTAGAGGGAGGTCTAGTTCTGTCCCAGTTCCTGAACAGGGTTGGGGCGTTTATAGTTCTGGTCCTTTTTTAGTATTTCACGGTCAAGTTCCTGGACTAACCTTGCCTAATGGAAGCCCGAGAGGTGGTCCTAGGCGTGGCGATTTCGGTGACTATTTTATGGGTTCTGGACTGGAAGAACTTATTGAACAACTAACCATGAATGATCGGCGTGGTCCACCCCCAGCTGCACGATCTTCAATCGATGCAATGCCTACTATTAGGATCACACAGGCGCATCTTCGATCAGATTCACATTGTCCAGTCTGCAAAGATAAATTTGAACTTGGTTCTGAAGCCAGAGAGATGCCATGTGACCATATTTACCATTCTGAATGTATTGTTCCTTGGTTGGTGCAACATAACTCATGTCCTGTTTGCCGTGTTGAGCTACCACCACAAGGACAGATGAGTTCTCGTGGTAGTAGTCGAAGCAACAATGGTGGAAATGGTAGCTCAAGGGGCAGGGAGAGTGACCGTCCAAACAATGGAAGGAGAAATCCGTTTTCGTTTCTGTGGCCGTTCCGTTCTTCTAGTTCAAACAATAATCAATATTCCGAGACTGGAGGTAGCAGCTCTTCAACCAATGCTGACCAGAATAATGGAACACGTTATAATGGATGGCATTATGATAACTAA 978 0.4509 MSSGATHWCYECSRPIVLEGRDVVCPYCDEGFVQEINEMRGTAPQNTFPSRSGEFNQMPDLFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVPEQGWGVYSSGPFLVFHGQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPAARSSIDAMPTIRITQAHLRSDSHCPVCKDKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPVCRVELPPQGQMSSRGSSRSNNGGNGSSRGRESDRPNNGRRNPFSFLWPFRSSSSNNNQYSETGGSSSSTNADQNNGTRYNGWHYDN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02618 325 MobiDBLite consensus disorder prediction 285 325 - -
Mepo7g02618 325 MobiDBLite consensus disorder prediction 246 325 - -
Mepo7g02618 325 SMART ring_2 200 240 IPR001841 -
Mepo7g02618 325 Pfam zinc-ribbon 6 36 IPR039525 GO:0061630
Mepo7g02618 325 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 163 247 IPR013083 -
Mepo7g02618 325 ProSiteProfiles Zinc finger RING-type profile. 200 241 IPR001841 -
Mepo7g02618 325 Pfam Ring finger domain 199 241 IPR001841 -
Mepo7g02618 325 SUPERFAMILY RING/U-box 180 247 - -
Mepo7g02618 325 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 137 245 - -
Mepo7g02618 325 MobiDBLite consensus disorder prediction 248 270 - -
Mepo7g02618 325 FunFam E3 ubiquitin-protein ligase RING1-like 164 247 - -
Mepo7g02618 325 CDD RING-H2_RNF126-like 200 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02618 Mepo-Chr7 37425425 37430377 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02618 144 249 C3H Transcription Factor Family AT5G01980 43.519 1.75e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02618 K11982 - gmx:100813674 538.88