Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02567 ATGGGTATGTTTGTTGTAGCACCATCTTCTTTTCATCACCATAACAATCATGAAGCTCTTATGTCTGATCCTCACTCTCTTAACCCCGCCACCGCTCTCGGTGTCGGGGTTATACCTTTACTCACAGCTTCTCCATGTCTTGAAAATGAAAACATGTTAAACAATAGAAGAAACCAACAAGGAATTCAGTTTTGGCATCAACAGCAACAAAGTCCACATTCACACTATTTGAAAAAACAACAAGGTTTTCTTGATCATCATAATACTAGTCCAACAAATTTGGTTCATGGTGGTGCTGGGTTAACTGCTTCTGCTACCAGTAGTGGTGGAGGAACAACAACGTGTCAAGATTGTGGAAATCAAGCAAAGAAAGATTGTAGTAATAGAAGGTGTAGAACTTGTTGTAAAAGTAGAGGTTTTGATTGCCCTACTCATGTTAAGAGTACTTGGGTACCTGCTGCTAGAAGAAGGGAACGCCTTTCTTCAACCGCGACAACCACGGTGGTTGCTGCTGGTGGTTCTAGTGGTTCAACTTCTGGTGCTAAGAAACCTAGACTTATTGCTTCACAAACTACTTCTCATACTTCTACTTCTAATACCACCCCTCCTAGAAGCTTTGATACTACCTCTACCCATCAAGATGCAGGTTTCAAAGAGTCAATGCCAGGTCAAGTACGTGCACCGGCAGTATTCAAATGTGTTAGAGTGACATCAGTGGATGATGGAAAAGATGAGTATGCATATCAAGCTGTAGTGAAGATTGGTGGCCATGTTTTCAAAGGTTTTCTTTATGATCATGGTGTTGAGAATAGGGAAGTTTATCCTAACCTTTCTGAGCTTCATTTAGGTGGTGGTGGTGGTAATAATAATGGTGGTGCTACTAGAAATGGAGTGTCTTCTTCATCACCAATGATGGATCATTCTCATGATGTTTATGCAGCAGCTTCAAGTGGTGGTGGAGGATTACTTGGAGGTTCAGCTTATGGTAATCAAATAAATTGA 1002 0.4102 MGMFVVAPSSFHHHNNHEALMSDPHSLNPATALGVGVIPLLTASPCLENENMLNNRRNQQGIQFWHQQQQSPHSHYLKKQQGFLDHHNTSPTNLVHGGAGLTASATSSGGGTTTCQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERLSSTATTTVVAAGGSSGSTSGAKKPRLIASQTTSHTSTSNTTPPRSFDTTSTHQDAGFKESMPGQVRAPAVFKCVRVTSVDDGKDEYAYQAVVKIGGHVFKGFLYDHGVENREVYPNLSELHLGGGGGNNNGGATRNGVSSSSPMMDHSHDVYAAASSGGGGLLGGSAYGNQIN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02567 333 MobiDBLite consensus disorder prediction 159 219 - -
Mepo7g02567 333 NCBIfam putative zinc finger domain, LRP1 type 114 156 IPR006510 -
Mepo7g02567 333 Pfam Domain of unknown function (DUF702) 112 269 - -
Mepo7g02567 333 NCBIfam LRP1 C-terminal domain 221 268 IPR006511 -
Mepo7g02567 333 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 15 314 IPR007818 GO:0003700|GO:0006355
Mepo7g02567 333 MobiDBLite consensus disorder prediction 159 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02567 Mepo-Chr7 36885924 36888559 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02567 3 312 C2H2 Transcription Factor Family AT5G12330 52.025 1.74e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Mepo7g02567 DUF702 1.7e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02567 - - tpra:123922661 498.434