Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mepo7g02563 | ATGGAAGAATCAAGTGAGTTGCAACCAGAAGAAAATAAAGTCTCCGCGGAGAAGTTTCCAAAAAGAAAGCTCAAAACGCCTGCACAGCTTAAGGGCTTGGAGAAATTTTATACGGAGCACAAATATCCGACAGAGGAATTGAAATTAGCAATTGCTGAGGAGTTAGAGTTGACAGAAAAGCAAGTTTCTGGATGGTTTTGCCACCGAAGGTTAAAGGATAAAAGATTGTTGAAAGAAGAAGCAAACGCTAATGGACGACAAGATCGTTCAAGCGGTGTCATCCAGGATCGTGGCAGTGGACTTGGGCAAGATTCGTGTGGAAGCAGTAAACATGGTGATTATAAGTATCTGGATCCTAAAGAGGTTGAGAGCAATGGCCTCTACAATCGTGATTTGTCTGTTGCAGATATGACGTACGGACGCAGGAATCATTTTTCTGAAAATGTCAGTGGAATGGACGATGACACGTCATCTGAGAGTAGCTCTTATTTGCAAGAACGTATGTATCCTCAAGGCCAAGATCCATATGAGATGGAGCCTTCTAGATATAGCAAAGCTCTTCCACCCTTAAATCCGAAAGGTGCAATCAACATGGGATATAAACCATCGGGATATTTGAAAGTGAAGGGTGAGATAGAACATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGAATTATCAGGAAGATGGTCCACTACTTGGTGTAGAATTTGATCCACTTCCTCCAGGGGCATTTGAATGCCAAACTGAAGACACAGTTCATGAACCATACCATATTGCTGATCCTGCTCTTCTGAATTCTCCAGAAATCTCCACTGTGAAAAGTCGACCTGGTCTTACCTCTAGATATGATTCATATTATACTAAACATGGTTCCCAAGATACTCATATGGAAGGAGTTGACTTTGGTTCGTTGCATGATGTTCATGTTCAGGATAAACAAGATAAGAAAGCTTTCCATGGTACCAAACATAGACAAACTTTTCAGAGTAATGCCAGTCGTTTTCCTGGCAGAAACTCTTCCTTAGATTTGTATGGAGACTCTACTGGAGAAGCTGCTTATAACATCACTAAGAATCATAGAAAGGATGCCAAGCGCGGTGTTGAGGGTATGAGATCTGATTCTACTTCTAACCATAGTGATCGCTATGAAGAAAATCTTCCAGTCAAACACGCAGACTTCCTACAATATAACTATGAAAATGCCAATCCAAAGAATGTGCAAAGGAGTGTTCATGCAGACATTCTTCAATATGACTATGATAATGTCAATCCAAAGAAAGCGCAAAGGAGTGAACACATAAAATCTAAACCTTCAAACTCAATCCACAATTCTCGAGGTTCTGTGGATACTGAAGAAAGAGGGCTATCTTCTAGGATGACTAAGGAAGAGTTGTTTAAGGGGGACAGGAAGGCAAAAAAGCAACATCGCGATGCAGGTGGACCAGGGATGCTTTCAAATGAGACTATGGTTGCAAAACGACTTAAAGCCAATACGTTTCAACCATACAATATGAAACAAGTTCCTGTTGCCGAGATAGAACCAAGGAAAACTCAGAGATCTGCTACAGAGATGCCGTCTAGCTTTAGCGAGGATGAAACTGCTGATACCAGTTCCTCACTGGATTGA | 1635 | 0.4128 | MEESSELQPEENKVSAEKFPKRKLKTPAQLKGLEKFYTEHKYPTEELKLAIAEELELTEKQVSGWFCHRRLKDKRLLKEEANANGRQDRSSGVIQDRGSGLGQDSCGSSKHGDYKYLDPKEVESNGLYNRDLSVADMTYGRRNHFSENVSGMDDDTSSESSSYLQERMYPQGQDPYEMEPSRYSKALPPLNPKGAINMGYKPSGYLKVKGEIEHAAITAVKKQLGRNYQEDGPLLGVEFDPLPPGAFECQTEDTVHEPYHIADPALLNSPEISTVKSRPGLTSRYDSYYTKHGSQDTHMEGVDFGSLHDVHVQDKQDKKAFHGTKHRQTFQSNASRFPGRNSSLDLYGDSTGEAAYNITKNHRKDAKRGVEGMRSDSTSNHSDRYEENLPVKHADFLQYNYENANPKNVQRSVHADILQYDYDNVNPKKAQRSEHIKSKPSNSIHNSRGSVDTEERGLSSRMTKEELFKGDRKAKKQHRDAGGPGMLSNETMVAKRLKANTFQPYNMKQVPVAEIEPRKTQRSATEMPSSFSEDETADTSSSLD | 544 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mepo7g02563 | 544 | CDD | homeodomain | 21 | 75 | IPR001356 | GO:0003677 | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 508 | 544 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 427 | 441 | - | - | |
| Mepo7g02563 | 544 | SMART | HOX_1 | 18 | 80 | IPR001356 | GO:0003677 | |
| Mepo7g02563 | 544 | SUPERFAMILY | Homeodomain-like | 16 | 78 | IPR009057 | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 7 | 24 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 449 | 480 | - | - | |
| Mepo7g02563 | 544 | Gene3D | - | 10 | 92 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 80 | 114 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 362 | 384 | - | - | |
| Mepo7g02563 | 544 | Pfam | Homeodomain | 21 | 75 | IPR001356 | GO:0003677 | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 427 | 489 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 150 | 165 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 522 | 544 | - | - | |
| Mepo7g02563 | 544 | ProSiteProfiles | 'Homeobox' domain profile. | 16 | 76 | IPR001356 | GO:0003677 | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 145 | 165 | - | - | |
| Mepo7g02563 | 544 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 1 | 544 | - | - | |
| Mepo7g02563 | 544 | MobiDBLite | consensus disorder prediction | 86 | 106 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mepo7g02563 | Mepo-Chr7 | 36803947 | 36809716 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mepo7g02563 | 3 | 544 | Homeobox Transcription Factor Family | AT4G03250 | 39.432 | 1.10e-84 | 270 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | HB-other | Mepo7g02563 | Homeodomain | 5.2e-15 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mepo7g02563 | - | - | gmx:100805913 | 748.814 |