Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo7g02562 ATGGAAGGGTTCGGAATGAATTCGGATCTTAGCAGAACTGGTGCTGTTGAAAGAGACATTGAGCAGGCCATTACTGCATTGAAAAAAGGGGCTTGCTTGCTCAAGTATGGAAGAAGGGGAAAGCCCAAGTTTTGCCCCTTTCGGCTTTCCAATGATGAATCTGTTTTGATATGGTTCTCAGGGAAAGAAGAGAAGCACCTTAAACTGAGTCACGTCTCTAGAATTATATCTGGACAACGCACACCTATCTTTCAAAGATATCCGCGACCTGAGAAGGAATACCAGTCATTTTCTCTTATCTACAATGACAGGTCATTGGACTTGATATGCAAGGATAAAGATGAGGCTGAGGTTTGGTTCAGTGGTTTGAAAGCATTAATTTCACGTAGCCATCACCGGAAGTGGAGAACAGAGTCAAGAAGTGATGGTATTCCGTCTGAAGCTAATAGTCCTCGAACATACACAAGAAGAAGTTCCCCTTTACATTCTCCATTTGGTAGTAATGAGAGTTTGCAGAAGGATAGTGGGGATCACCTTCGCCTTCATAGCCCATATGAGAGCCCCCCTAAAAATGGTTTGGATAAAGCATTAGATGTGGTCTTGTATGCCGTTCCTCAAAAAAGTTTCTTCCCTCTGGATTCTGCCAGTGCTTCTGTCCACTCTATATCATCCGGAGGATCAGATAGTATGCATGGTCACATGAAGACAATGGGTATGGATGCTTTTAGAGTTAGTCTATCAAGTGCTGTCAGCTCATCTAGCCAAGGTTCTGGTCATGATGATGGTGATGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGCACAGGTGATGGTGTTGTTGGTGGTGGTAATCATAGAGTTGGGAGTGGTTTGGGTGTAAAAATTGATTCTCTATTCCCAAAAGCATTAGAATCTGCGGTAGTTCTTGATGTGCAGAATATTGCTTGTGGTGGACGACATGCGGCCTTAGTGACCAAACAAGGCGAAATTTTCTCTTGGGGAGAGGAATCGGGAGGCAGGCTTGGGCATGGTGTAGACTCTGATGTTCTCCATCCGAAGCTTATAGACGCTCTAAGTAATACAAACATTGAGCTTGTAGCTTGTGGAGAGTCTCATACATGTGCTGTGACACTTTCAGGTGATCTTTATACATGGGGTAATGGTGCATACAATTATGGTCTTCTGGGGCATGGAAATCAAGTGAGCCACTGGGTCCCAAAGAGAGTAAATGGCCCCCTGGAAGGCATACACGTTTCATATATTTCATGTGGACCATGGCATACTGCTGTTGTAACATCTGCTGGGCAATTATTCACTTTCGGTGACGGCACATTTGGTGCTTTGGGTCATGGTGACCGAAAAAGTGTCTCATTACCAAGGGAAGTCGAGTCCCTCAAAGGTCTTCGTACTATGCGGGCTTCTTGTGGTGTTTGGCATACTGCTGCTGTTGTGGAAGTCATGGTTGGAAATTCAAGTTCCAGCAACTGCTCTTCAGGGAAGCTGTTTACTTGGGGTGATGGAGACAAAGGTCGACTCGGGCATGGTGATAAGGAAGCAAAACTTGTTCCAACCTGTGTTGCCCTTGTTGAACATAACTTTTGTCAAGTTGCTTGTGGACACAGTCTCACAGTTGCACTTACCACGTCAGGCCACGTTTATGCGATGGGAAGTCCTGTCTATGGCCAGTTAGGAAATCCTCAAGCTGATGGGAAGCTACCTACCCGTGTGGAAGGAAAACTGTTGAAGAGTTTTGTGGAGGAGATAGCTTGTGGTGCATATCATGTTGCAGTTCTAACTTTAAGGAATGAAGTTTACACCTGGGGGAAAGGTGCAAATGGACGTTTAGGCCATGGGGATACAGATGATAGAAATAATCCAACACTAGTAGATGCTCTGAAAGACAAACATGTAAAAAGTATTGCTTGTGGAACTAATTTCACTGCAGCTATCTGTTTACATAAGTGGGTATCTGGTGTTGATCAGTCTATGTGTTCAGGCTGTCGTCTGCCATTTAATTTCAAAAGAAAACGTCACAATTGTTATAATTGTGGACTTGTTTTTTGCCATTCATGTAGTAGTAAGAAGTCCCTTAAGGCTTCAATGGCTCCAAACCCCAACAAACCTTATCGCGTATGTGATGGTTGTTTTAATAAACTTAGGAAAACTTTAGAAACTGATTCTTCATCTCATTCTTCCATTAGCAGAAGAGGAAGTATTAATCAGGGGTCTCTTGAGTTGATTGATAAGGATGATAAATTGGATACCAGATCTCGTAATCAACTTGCCAGATTTTCTTCGATGGAATCCTTCAAACAAGTGGAAAGCAGATCTTCAAAGAAAAACAAAAAATTGGAGTTCAACAGTAGCCGTGTCTCTCCTGTTCCAAATGGAGGTTCACAATGGGGAGCACTGAATATTTCTAAATCCTTTAATCCTGTTTTTGGATCGTCAAAGAAATTTTTCTCGGCTTCTGTTCCTGGATCTAGAATTGTTTCCCGGGCAACATCCCCAATATCTAGACGGCCTAGCCCACCTCGTTCAACTACTCCAACACCAACACTGGGAGGTCTTACTACCCCAAAAATTGTTGTGGATGATGCTAAGAAGACTAATGATAGCCTCAGTCAGGAGGTTATTAAATTAAGATCACAGGTGGAAAGCCTGACTCGGAAGGCCCAACTTCAAGAAATCGAGTTGGAAAGAACTTCTAAACAACTAAAAGATGCAATAGCAATTGCTGGGGAAGAAACTGCCAAGTGTAAAGCAGCAAAGGAAGTGATCAAGTCACTTACTGCCCAGTTGAAGGACATGGCTGAGAGGCTACCTGTTGGGACAGCTAAGAGTGTCAAATCACCTTCTATTGCTTCCAATGAACTTAGCTTTCCTGCCATTGATCGATTAAATATTCAAGCAACAAGCCCAGAAGCAGATTTAACTGGATCAAATACTCAGTTACTTTCGAATGGATCAAGCACTGTTAGTAATCGCAGTACAGGTCAGAATAAACAGAGCCCATCGGATTCAACTAATAGAAATGGGAGCAGAACAAAGGATAGTGAATCCCGTAGTGAGACTGAATGGGTTGAGCAAGATGAACCTGGTGTATATATTACACTCACGTCCCTACCAGGAGGTGTAATAGATCTTAAGAGAGTTCGCTTCAGTCGGAAGCGGTTTAGTGAGAAACAAGCAGAAAATTGGTGGGCTGAGAATCGCGTAAGAGTATATGAACAATACAATGTTCGCATGGTTGACAAGTCCAGTGTTGGTGTTGGGAGTGAGGACCTGGCTAATTGA 3297 0.4322 MEGFGMNSDLSRTGAVERDIEQAITALKKGACLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTRRSSPLHSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDKALDVVLYAVPQKSFFPLDSASASVHSISSGGSDSMHGHMKTMGMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVVGGGNHRVGSGLGVKIDSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGESHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHNFCQVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDGCFNKLRKTLETDSSSHSSISRRGSINQGSLELIDKDDKLDTRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSPVPNGGSQWGALNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKKTNDSLSQEVIKLRSQVESLTRKAQLQEIELERTSKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLKDMAERLPVGTAKSVKSPSIASNELSFPAIDRLNIQATSPEADLTGSNTQLLSNGSSTVSNRSTGQNKQSPSDSTNRNGSRTKDSESRSETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAENWWAENRVRVYEQYNVRMVDKSSVGVGSEDLAN 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo7g02562 1098 Gene3D - 18 136 IPR011993 -
Mepo7g02562 1098 Pfam Pleckstrin homology domain 21 127 IPR001849 -
Mepo7g02562 1098 Pfam Unstructured region between BRX_N and BRX domain 952 1018 - -
Mepo7g02562 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 328 379 IPR000408 -
Mepo7g02562 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 499 549 IPR000408 -
Mepo7g02562 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 266 327 IPR000408 -
Mepo7g02562 1098 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 63 939 - -
Mepo7g02562 1098 Pfam FYVE zinc finger 654 720 IPR000306 GO:0046872
Mepo7g02562 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 602 653 IPR000408 -
Mepo7g02562 1098 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 314 324 IPR000408 -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 976 1012 - -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 136 190 - -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 766 801 - -
Mepo7g02562 1098 Coils Coil 864 905 - -
Mepo7g02562 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 328 376 IPR000408 -
Mepo7g02562 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 549 598 IPR000408 -
Mepo7g02562 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 498 546 IPR000408 -
Mepo7g02562 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 603 650 IPR000408 -
Mepo7g02562 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 435 483 IPR000408 -
Mepo7g02562 1098 Pfam Regulator of chromosome condensation (RCC1) repeat 379 431 IPR000408 -
Mepo7g02562 1098 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 658 720 IPR017455 -
Mepo7g02562 1098 Gene3D - 390 492 IPR009091 -
Mepo7g02562 1098 Gene3D - 223 389 IPR009091 -
Mepo7g02562 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 550 601 IPR000408 -
Mepo7g02562 1098 Gene3D - 493 665 IPR009091 -
Mepo7g02562 1098 SUPERFAMILY FYVE/PHD zinc finger 654 725 IPR011011 -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 1013 1029 - -
Mepo7g02562 1098 Pfam Transcription factor regulating root and shoot growth via Pin3 1024 1079 IPR013591 -
Mepo7g02562 1098 ProSiteProfiles BRX domain profile. 1025 1080 IPR013591 -
Mepo7g02562 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 380 434 IPR000408 -
Mepo7g02562 1098 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 435 486 IPR000408 -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 142 172 - -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 832 861 - -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 976 1029 - -
Mepo7g02562 1098 MobiDBLite consensus disorder prediction 787 801 - -
Mepo7g02562 1098 SUPERFAMILY PH domain-like 19 127 - -
Mepo7g02562 1098 Coils Coil 920 940 - -
Mepo7g02562 1098 PRINTS Chromosome condensation regulator RCC1 signature 421 437 IPR000408 -
Mepo7g02562 1098 PRINTS Chromosome condensation regulator RCC1 signature 437 451 IPR000408 -
Mepo7g02562 1098 PRINTS Chromosome condensation regulator RCC1 signature 597 618 IPR000408 -
Mepo7g02562 1098 PRINTS Chromosome condensation regulator RCC1 signature 330 346 IPR000408 -
Mepo7g02562 1098 PRINTS Chromosome condensation regulator RCC1 signature 311 324 IPR000408 -
Mepo7g02562 1098 PRINTS Chromosome condensation regulator RCC1 signature 539 557 IPR000408 -
Mepo7g02562 1098 PRINTS Chromosome condensation regulator RCC1 signature 380 396 IPR000408 -
Mepo7g02562 1098 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 421 431 IPR000408 -
Mepo7g02562 1098 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 666 726 IPR013083 -
Mepo7g02562 1098 SMART fyve_4 652 721 IPR000306 GO:0046872
Mepo7g02562 1098 FunFam Putative E3 ubiquitin-protein ligase HERC1 660 728 - -
Mepo7g02562 1098 FunFam PH, RCC1 and FYVE domains-containing protein 1 237 488 - -
Mepo7g02562 1098 SUPERFAMILY RCC1/BLIP-II 266 655 IPR009091 -
Mepo7g02562 1098 FunFam PH, RCC1 and FYVE domains-containing protein 1 489 659 - -
Mepo7g02562 1098 CDD FYVE_like_SF 663 716 - -
Mepo7g02562 1098 CDD PH_PLC_plant-like 18 128 - -
Mepo7g02562 1098 Pfam Transcription factor BRX N-terminal domain 915 948 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo7g02562 Mepo-Chr7 36785691 36794747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo7g02562 924 1089 Major Intrinsic Protein MIP AT1G31880 33.333 7.84e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo7g02562 - - gmx:100802464 1945.24